CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70829	Canola	cytosol	96.21	55.58
CDY71238	Canola	cytosol	65.52	46.91
AT4G38530.1	Thale cress	cytosol	82.07	42.2
CDY32694	Canola	cytosol	65.17	35.86
CDY02827	Canola	cytosol	65.17	35.86
CDY52120	Canola	cytosol, mitochondrion	65.52	33.99
CDX80344	Canola	cytosol	65.17	33.81
CDX71156	Canola	cytosol, mitochondrion	65.52	31.1
CDY61028	Canola	cytosol, mitochondrion	65.17	30.93
Solyc06g082000.2.1	Tomato	cytosol	49.66	25.44
KRH17039	Soybean	cytosol, mitochondrion	50.34	25.35
CDY47356	Canola	mitochondrion	48.62	25.0
KRH72676	Soybean	cytosol, mitochondrion	32.07	24.73
CDY70294	Canola	mitochondrion	46.21	24.54
CDY22153	Canola	mitochondrion	47.59	23.75
CDY35983	Canola	mitochondrion	47.59	23.59
VIT_06s0004g06670.t01	Wine grape	cytosol	47.24	23.58
CDY27254	Canola	mitochondrion	46.9	23.37
CDX72188	Canola	mitochondrion	46.55	23.2
HORVU1Hr1G014570.19	Barley	mitochondrion	45.52	22.64
TraesCS1D01G071800.3	Wheat	mitochondrion	45.86	22.47
TraesCS1A01G069300.1	Wheat	mitochondrion	44.83	22.22
CDY27998	Canola	cytosol	41.72	22.16
CDY71544	Canola	cytosol	36.9	21.97
Os05t0127200-01	Rice	plasma membrane	45.17	21.91
CDY01144	Canola	cytosol	35.17	21.7
HORVU1Hr1G014580.9	Barley	mitochondrion	45.52	21.64
CDY65008	Canola	cytosol	25.86	21.49
CDY52122	Canola	cytosol, mitochondrion	43.45	21.39
CDX80341	Canola	mitochondrion	43.45	21.36
CDY60344	Canola	cytosol	44.14	21.33
GSMUA_Achr10P...	Banana	mitochondrion	37.93	21.32
CDY07623	Canola	cytosol	43.45	21.18
OQU77319	Sorghum	mitochondrion	43.79	21.1
CDX74806	Canola	cytosol	43.45	21.0
CDY07057	Canola	cytosol	44.14	20.98
CDY20520	Canola	cytosol	43.79	20.89
CDY32691	Canola	cytosol	42.76	20.88
CDY61706	Canola	cytosol	43.79	20.82
CDX80342	Canola	cytosol	41.72	20.54
CDY52121	Canola	cytosol	41.03	20.2
Zm00001d047447_P002	Maize	extracellular	43.45	18.95
PGSC0003DMT400078046	Potato	cytosol	25.86	16.97
CDY26990	Canola	cytosol	6.21	12.5
CDY33201	Canola	cytosol	3.1	7.03
CDX75008	Canola	cytosol	3.79	6.36
CDY26989	Canola	cytosol, plastid	4.14	6.06
CDY69947	Canola	cytosol	1.03	1.44

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	GO:A0A078JTX5	UniProt:A0A078JTX5
EnsemblPlants:CDY68902	ProteinID:CDY68902	ProteinID:CDY68902.1	InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824
GO:GO:0004435	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	EnsemblPlantsGene:GSBRNA2T00080991001	InterPro:IPR000909	InterPro:IPR017946
PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	PRINTS:PR00390	PFscan:PS50007
PANTHER:PTHR10336	PANTHER:PTHR10336:SF92	MetaCyc:PWY-6351	MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00148
SUPFAM:SSF47473	SUPFAM:SSF51695	UniParc:UPI0004EF0E20	SEG:seg	:	:

Description

BnaCnng61000DPhosphoinositide phospholipase C (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JTX5]

Coordinates

chrLK038235:+:3291..4630

Molecular Weight (calculated)

33043.1 Da

IEP (calculated)

7.969

GRAVY (calculated)

-0.630

Length

290 amino acids

Sequence
(BLAST)

001: MSETFKVCFC CSRSFKEKTR QPPGSIKRLF EAYSRNGKMS SDDLLRFVSE VQGEGHAGMD YVQGIFNSVK HHNVFHIHGF VHLNAFYRYL FSDTNSPLPL
101: SRQVHHDMKA PLAHYFVYTG HNSYLTGNQV NSRSSVEPIV QSLRKGVKVI ELDLWPNPSG NAAEVRHGGT LTSHEDLQKC LNAIKENAFY VSDYPVIVTL
201: EDHLPPNLQG KVAKMLTRTF RGMLFRSDSE SCKNFPSPEE LKKKILISTK PPKEYLESQA IQSSRRTPGT TNMSWRGENK IPEEDEEDEE

Best Arabidopsis Sequence Match ( AT3G08510.3 )
(BLAST)

001: MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVGIAG VPGDTVMKKT KTLEDNWIPA WDEVFEFPLT VPELALLRLE
501: VHEYDMSEKD DFGGQTCLPV WELSEGIRAF PLHSRKGEKY KSVKLLVKVE FV

Arabidopsis Description

PLC2Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A178VDK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.