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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71238 Canola cytosol 71.02 98.02
Bra002627.1-P Field mustard cytosol 93.02 97.56
CDY52120 Canola cytosol, mitochondrion 95.71 95.71
CDY32694 Canola cytosol 85.69 90.89
CDY02827 Canola cytosol 84.97 90.13
AT5G58670.1 Thale cress cytosol 86.58 86.27
CDY61028 Canola cytosol, mitochondrion 85.69 78.4
CDX71156 Canola cytosol, mitochondrion 85.51 78.23
CDY68902 Canola cytosol 33.81 65.17
CDY70829 Canola cytosol 56.17 62.55
CDY65008 Canola cytosol 36.85 59.03
KRH72676 Soybean cytosol, mitochondrion 36.85 54.79
CDY01144 Canola cytosol 45.62 54.26
PGSC0003DMT400078046 Potato cytosol 41.5 52.49
CDY69947 Canola cytosol 19.5 52.15
KRH17039 Soybean cytosol, mitochondrion 53.49 51.91
CDY70294 Canola mitochondrion 50.45 51.65
CDY71544 Canola cytosol 44.19 50.72
CDY47356 Canola mitochondrion 51.16 50.71
CDY27998 Canola cytosol 48.84 50.0
Solyc06g082000.2.1 Tomato cytosol 50.45 49.82
GSMUA_Achr10P... Banana mitochondrion 45.8 49.61
CDX72188 Canola mitochondrion 51.52 49.48
CDY35983 Canola mitochondrion 51.7 49.4
CDY27254 Canola mitochondrion 51.34 49.31
VIT_06s0004g06670.t01 Wine grape cytosol 51.16 49.23
CDY22153 Canola mitochondrion 51.16 49.23
HORVU1Hr1G014570.19 Barley mitochondrion 50.98 48.89
TraesCS1D01G071800.3 Wheat mitochondrion 51.7 48.82
TraesCS1A01G069300.1 Wheat mitochondrion 50.8 48.55
Os05t0127200-01 Rice plasma membrane 50.98 47.66
HORVU1Hr1G014580.9 Barley mitochondrion 51.16 46.89
CDY52122 Canola cytosol, mitochondrion 48.66 46.18
CDX80341 Canola mitochondrion 48.3 45.76
OQU77319 Sorghum mitochondrion 49.2 45.68
CDY32691 Canola cytosol 48.3 45.45
CDY61706 Canola cytosol 49.02 44.92
CDY07623 Canola cytosol 47.76 44.87
CDY60344 Canola cytosol 48.12 44.83
CDY07057 Canola cytosol 48.84 44.75
CDX74806 Canola cytosol 47.94 44.67
CDY20520 Canola cytosol 48.12 44.24
CDY52121 Canola cytosol 45.44 43.12
CDX80342 Canola cytosol 45.44 43.12
Zm00001d047447_P002 Maize extracellular 48.84 41.05
CDY33201 Canola cytosol 8.77 38.28
CDX75008 Canola cytosol 11.45 36.99
CDY26989 Canola cytosol, plastid 10.55 29.8
CDY26990 Canola cytosol 4.29 16.67
Protein Annotations
KEGG:00562+3.1.4.11KEGG:04070+3.1.4.11Gene3D:1.10.238.10Gene3D:2.60.40.150Gene3D:3.20.20.190MapMan:5.7.2.3.2
GO:A0A078CWD8InterPro:C2_domInterPro:C2_domain_sfEnsemblPlants:CDX80344ProteinID:CDX80344ProteinID:CDX80344.1
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSGO:GO:0003674GO:GO:0003824GO:GO:0004435GO:GO:0006629
GO:GO:0007154GO:GO:0007165GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016787GO:GO:0035556EnsemblPlantsGene:GSBRNA2T00133393001InterPro:IPR000008InterPro:IPR000909InterPro:IPR001711
InterPro:IPR017946InterPro:IPR035892PFAM:PF00168PFAM:PF00387PFAM:PF00388PFAM:PF09279
InterPro:PI-PLC_famInterPro:PLC-like_Pdiesterase_TIM-brlInterPro:PLC_EF-hand-likeInterPro:PLipase_C_PInositol-sp_X_domInterPro:PLipase_C_Pinositol-sp_YPRINTS:PR00390
ScanProsite:PS00018PFscan:PS50004PFscan:PS50007PFscan:PS50008PANTHER:PTHR10336PANTHER:PTHR10336:SF105
MetaCyc:PWY-6351MetaCyc:PWY-6367MetaCyc:PWY-7039SMART:SM00148SMART:SM00149SMART:SM00239
SUPFAM:SSF47473SUPFAM:SSF49562SUPFAM:SSF51695UniParc:UPI0004EDAD2CSEG:seg:
Description
BnaC09g33980D
Coordinates
chrLK031820:+:1992684..1995336
Molecular Weight (calculated)
63772.1 Da
IEP (calculated)
7.037
GRAVY (calculated)
-0.481
Length
559 amino acids
Sequence
(BLAST)
001: MKESFKVCFC CVRSFKVKTS EPPQEIKKLF DDYSGDGRMS ADEMLRFVIE VQGEKHADTN YVKDIFHRLK HHGVFHPRGI HLEGFYRYLL SDFNSPLHLS
101: GEVSQDMSQP LSHYFLYTGH NSYLTGNQLN SRSSTEPIVK ALRSGVRVIE LDLWPNSSGT EAEVRHGGTL TSTEDLQKCL NAVKENAFLV SEYPVVLTLE
201: DHLPPDLQKK VAKMVSKTFG ETLFRCTTDE HTECFPSPEA LKNKILISTK PPKEYLQTQV SLGSTTDESV KAKKVKEAEE LILDEDEETV AIEYRDLISI
301: HAGNRKGGMK NCLNGDPNRV IRLSMSEQWL ETLAKTRGPD LVKFTQRNIL RIFPKTTRID SSNYDPLVGW IHGAQMVAFN MQSHGRFLWM MQGMFKANGG
401: CGYVKKPDVL LSNGPGGETF DPSSKNLQIK TVLKIKIYNG EGWNMDFSQD HFDRYSPPDF YARARIPLDT TSHKTETGTD EWFPVWDKEF EFPLRVPELA
501: LLYIIVKDYD SNTQNDFAGQ ICLPLSEIRP GIRAVRLHDR AGEVYKHARL LVRFVLEPR
Best Arabidopsis Sequence Match ( AT5G58670.1 )
(BLAST)
001: MKESFKVCFC CVRNFKVKSS EPPEEIKNLF HDYSQDDRMS ADEMLRFVIQ VQGETHADIN YVKDIFHRLK HHGVFHPRGI HLEGFYRYLL SDFNSPLPLT
101: REVWQDMNQP LSHYFLYTGH NSYLTGNQLN SNSSIEPIVK ALRNGVRVIE LDLWPNSSGK EAEVRHGGTL TSREDLQKCL NVVKENAFQV SAYPVVLTLE
201: DHLTPILQKK VAKMVSKTFG GSLFQCTDET TECFPSPESL KNKILISTKP PKEYLQTQIS KGSTTDESTR AKKISDAEEQ VQEEDEESVA IEYRDLISIH
301: AGNRKGGLKN CLNGDPNRVI RLSMSEQWLE TLAKTRGPDL VKFTQRNLLR IFPKTTRFDS SNYDPLVGWI HGAQMVAFNM QSHGRYLWMM QGMFKANGGC
401: GYVKKPDVLL SNGPEGEIFD PCSQNLPIKT TLKVKIYTGE GWNMDFPLDH FDRYSPPDFY AKVGIAGVPL DTASYRTEID KDEWFPIWDK EFEFPLRVPE
501: LSLLCITVKD YDSNTQNDFA GQTCFPLSEV RPGIRAVRLH DRAGEVYKHV RLLMRFVLEP R
Arabidopsis Description
PLC1Phosphoinositide phospholipase C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39032]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.