Factsheet for GSMUA_Achr10P23020_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55940.1	GSMUA_Achr9P09250_001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01144	Canola	cytosol	56.01	61.49
PGSC0003DMT400016945	Potato	endoplasmic reticulum	58.14	60.73
Bra040049.1-P	Field mustard	cytosol	58.33	55.54
VIT_13s0067g00900.t01	Wine grape	mitochondrion	62.98	54.81
CDY27998	Canola	cytosol	57.95	54.76
GSMUA_Achr2P18980_001	Banana	mitochondrion	61.82	54.44
KRH31148	Soybean	mitochondrion	62.21	54.22
GSMUA_Achr5P28270_001	Banana	plasma membrane	62.02	53.87
KRG97732	Soybean	mitochondrion	61.63	53.72
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	61.05	53.12
GSMUA_Achr5P08470_001	Banana	mitochondrion	60.85	53.04
Bra029697.1-P	Field mustard	mitochondrion	57.56	52.66
Solyc05g052760.2.1	Tomato	plastid	59.5	52.66
Solyc06g051620.2.1	Tomato	cytosol, mitochondrion	57.56	52.57
CDY47356	Canola	mitochondrion	57.36	52.48
VIT_08s0105g00300.t01	Wine grape	cytosol	56.01	52.45
Bra032722.1-P	Field mustard	mitochondrion	56.98	52.22
KRH73190	Soybean	endoplasmic reticulum	60.47	52.0
CDY22153	Canola	mitochondrion	58.33	51.81
HORVU1Hr1G014570.19	Barley	mitochondrion	58.33	51.63
PGSC0003DMT400069760	Potato	mitochondrion	58.53	51.62
PGSC0003DMT400078046	Potato	cytosol	44.19	51.58
KRH14945	Soybean	mitochondrion	59.88	51.5
CDY35983	Canola	mitochondrion	58.33	51.45
TraesCS1A01G069300.1	Wheat	mitochondrion	57.95	51.11
Bra007201.1-P	Field mustard	mitochondrion	54.07	51.1
AT3G08510.1	Thale cress	mitochondrion	57.36	50.95
CDY70294	Canola	mitochondrion	53.68	50.73
GSMUA_AchrUn_...	Banana	mitochondrion	56.01	50.7
TraesCS1D01G071800.3	Wheat	mitochondrion	57.95	50.51
CDY65008	Canola	cytosol	34.11	50.43
OQU77319	Sorghum	mitochondrion	58.72	50.33
Os05t0127200-01	Rice	plasma membrane	58.14	50.17
PGSC0003DMT400049368	Potato	cytosol	57.36	49.66
HORVU1Hr1G014580.9	Barley	mitochondrion	58.53	49.51
AT3G55940.1	Thale cress	mitochondrion	56.01	49.49
CDY27254	Canola	mitochondrion	55.81	49.48
CDX72188	Canola	mitochondrion	55.62	49.31
VIT_08s0007g02280.t01	Wine grape	cytosol, mitochondrion	59.11	49.11
Solyc10g076710.1.1	Tomato	cytosol	56.98	48.92
VIT_06s0004g06670.t01	Wine grape	cytosol	54.46	48.36
AT5G58670.1	Thale cress	cytosol	51.94	47.77
Solyc06g082000.2.1	Tomato	cytosol	51.16	46.64
KRH17039	Soybean	cytosol, mitochondrion	51.36	46.01
CDY52120	Canola	cytosol, mitochondrion	49.81	45.98
CDX80344	Canola	cytosol	49.61	45.8
AT4G38530.1	Thale cress	cytosol	49.81	45.57
Bra020361.1-P	Field mustard	cytosol	46.51	45.45
Bra002627.1-P	Field mustard	cytosol	46.71	45.22
KRH72676	Soybean	cytosol, mitochondrion	32.95	45.21
CDY02827	Canola	cytosol	45.93	44.97
CDY32694	Canola	cytosol	45.74	44.78
Zm00001d047447_P002	Maize	extracellular	57.36	44.51
CDY70829	Canola	cytosol	43.02	44.22
CDY71238	Canola	cytosol	34.11	43.46
Bra033567.1-P	Field mustard	cytosol	44.19	43.02
Bra006749.1-P	Field mustard	cytosol, mitochondrion	50.19	42.39
CDY61028	Canola	cytosol, mitochondrion	49.81	42.06
CDX71156	Canola	cytosol, mitochondrion	49.61	41.9
CDY68902	Canola	cytosol	21.32	37.93

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787
GO:GO:0035556	EnsemblPlantsGene:GSMUA_Achr10G23020_001	EnsemblPlants:GSMUA_Achr10P23020_001	EnsemblPlants:GSMUA_Achr10T23020_001	InterPro:IPR000008	InterPro:IPR000909
InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	UniProt:M0RKM7	PFAM:PF00168	PFAM:PF00387
PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390
PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF101	SMART:SM00148
SMART:SM00149	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI000295C3BD	SEG:seg

Description

Phosphoinositide phospholipase C 6 [Source:GMGC_GENE;Acc:GSMUA_Achr10G23020_001]

Coordinates

chr10:+:27931478..27936909

Molecular Weight (calculated)

58810.6 Da

IEP (calculated)

6.643

GRAVY (calculated)

-0.402

Length

516 amino acids

Sequence
(BLAST)

001: MRKAGVRSRL PIGHLVYQDM TAPLSHYFIY TGHNSYLTGN QLSSDCSDVP IIKALRSGVR VIELDLWPNE TNNNVNVLHG RTLTSPIKLI KCLRSIKEHA
101: FEASPYPVII TLEDHLTPNL QAKAAKMLTK TFGNILYTPT SESLEVFPSP EELKMRIMIS TKPPKEYLES KTTMTSPTTS HKVPTICDRL FYPITKLFIK
201: EKEHEGQNVD EEEWSEEVSD HEAITNDHEL NEHYQEEDPE EGDGKSPIEY KRLIAIAAKK MQGDLTEALK IDPHKATRLS LSELALEKAA SSHGTELIRF
301: TQRNLLRIFP KGTRVTSSNY KPLLGWMHGA QMVALNMQGY GQPLWLLHGM FKANGGCGYV KKPDILLNDN PDQLFDPKAT LLPMKTLKVR VYTGDGWRFD
401: YHKSHFDTFS PPDFYARVGI AGVPVDTTMK QTKIIEDCWT PVWDEEFEFK LTVPELALLR IEVFEHDVSD QDDFAGQTCL PVWELRTGIR SVSLCDRKGQ
501: TLKSVKLLMR FDFIFH

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.