Factsheet for VIT_08s0007g02280.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0067g00900.t01	Wine grape	mitochondrion	71.5	74.87
VIT_08s0105g00300.t01	Wine grape	cytosol	60.87	68.6
PGSC0003DMT400049368	Potato	cytosol	65.54	68.29
Solyc10g076710.1.1	Tomato	cytosol	65.86	68.05
VIT_06s0004g06650.t01	Wine grape	cytosol	50.56	64.21
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	59.42	62.76
VIT_13s0067g00890.t01	Wine grape	cytosol	57.49	60.3
VIT_06s0004g06670.t01	Wine grape	cytosol	56.2	60.07
GSMUA_Achr10P...	Banana	mitochondrion	49.11	59.11
TraesCS1A01G069300.1	Wheat	mitochondrion	52.98	56.24
TraesCS1D01G071800.3	Wheat	mitochondrion	53.14	55.74
Os05t0127200-01	Rice	plasma membrane	53.62	55.69
HORVU1Hr1G014570.19	Barley	mitochondrion	52.17	55.57
OQU77319	Sorghum	mitochondrion	53.46	55.15
HORVU1Hr1G014580.9	Barley	mitochondrion	52.82	53.77
Zm00001d047447_P002	Maize	extracellular	51.05	47.67

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	EntrezGene:100246006	wikigene:100246006	Gene3D:2.60.40.150
Gene3D:3.20.20.190	MapMan:5.7.2.3.2	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:CCB55494	ProteinID:CCB55494.1
InterPro:EF-hand-dom_pair	UniProt:F6HKS4	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435
GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711
InterPro:IPR017946	InterPro:IPR035892	EntrezGene:LOC100246006	wikigene:LOC100246006	PFAM:PF00168	PFAM:PF00387
PFAM:PF00388	PFAM:PF09279	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom
InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336
PANTHER:PTHR10336:SF92	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562
SUPFAM:SSF51695	UniParc:UPI0002108807	ArrayExpress:VIT_08s0007g02280	EnsemblPlantsGene:VIT_08s0007g02280	EnsemblPlants:VIT_08s0007g02280.t01	RefSeq:XP_002280430
RefSeq:XP_002280430.2	SEG:seg	:	:	:	:

Description

Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:F6HKS4]

Coordinates

chr8:+:16323252..16328331

Molecular Weight (calculated)

71028.9 Da

IEP (calculated)

6.012

GRAVY (calculated)

-0.532

Length

621 amino acids

Sequence
(BLAST)

001: MSKQTYRVCF CFRRGFKLKV AEAPSEIKAL FNDYSEQGVM SLEQLQKFLI EVQGEDEASM EDVQGIMDSL HEFKHLPIFQ LRKGLNLEAF FRYLCHDLNP
101: PLSPHNTVHH DMNAPLSHYF IYTGHNSYLT GNQLSSICSD VPVINSLQCG VRVIELDMWP NSTKDDIDVL HGRTLTTPVK LSKCLISIKK YAFVASEYPV
201: IITLEDHLTP DLQAKVAEMA TQIFGDLLFS PESECLAEFP SPESLKRQII ISTKPPKEYL ETKIKDKDEG SQKETASIQK KDNGSQKATK SAKKKDNGSQ
301: KAKYPSEDKT WGKEISDLKD ELEPFDKDEP EEGEDINEED MEDWDHKLQQ SAAPEYRRLI AIQAGKQKGG IKEWIRLDPD KVRRLSLSEQ ELENAIITHG
401: QDIIRFTQRN LLRVFPKVMR VDSSNYNPLI GWMHGAQMVA FNMQGYDRPL WLMQGMFRAN GGCGYVKKPD LLLKVGPHDK VFDPKANLPV KTTLKVKVYM
501: GEGWHLDFHH THFDIYSPPD FYTKVGIAGV PADSLMKKTK AVEDDWTPTW NEEFEFPLTA PELALLRIEV HEYDMSEKDD FGGQTCLPVS ELRTGIRAVP
601: LHNQKGEKYN SVKLLMRFEF V

Best Arabidopsis Sequence Match ( AT3G08510.1 )
(BLAST)

001: MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PGDTVMKKTK
501: TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V

Arabidopsis Description

PLC2Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A178VDK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.