Factsheet for Os05t0127200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0596900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55940.1	Os03t0596900-01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU77319	Sorghum	mitochondrion	81.77	81.23
TraesCS1A01G069300.1	Wheat	mitochondrion	76.76	78.46
TraesCS1D01G071800.3	Wheat	mitochondrion	76.59	77.36
HORVU1Hr1G014570.19	Barley	mitochondrion	74.75	76.67
HORVU1Hr1G014580.9	Barley	mitochondrion	76.92	75.41
Zm00001d047447_P002	Maize	extracellular	78.93	70.98
GSMUA_Achr10P...	Banana	mitochondrion	50.17	58.14
CDY01144	Canola	cytosol	45.32	57.66
Bra007201.1-P	Field mustard	mitochondrion	52.17	57.14
PGSC0003DMT400016945	Potato	endoplasmic reticulum	46.82	56.68
CDY70294	Canola	mitochondrion	51.67	56.59
KRH31148	Soybean	mitochondrion	55.52	56.08
VIT_13s0067g00900.t01	Wine grape	mitochondrion	55.02	55.48
Solyc05g052760.2.1	Tomato	plastid	54.01	55.4
Bra029697.1-P	Field mustard	mitochondrion	52.17	55.32
KRG97732	Soybean	mitochondrion	54.68	55.24
PGSC0003DMT400069760	Potato	mitochondrion	54.01	55.21
CDY27254	Canola	mitochondrion	53.34	54.81
Bra040049.1-P	Field mustard	cytosol	49.67	54.8
CDY27998	Canola	cytosol	50.0	54.76
CDX72188	Canola	mitochondrion	53.01	54.47
AT3G08510.1	Thale cress	mitochondrion	52.51	54.04
CDY35983	Canola	mitochondrion	52.84	54.02
CDY22153	Canola	mitochondrion	52.34	53.87
KRH73190	Soybean	endoplasmic reticulum	54.01	53.83
VIT_08s0007g02280.t01	Wine grape	cytosol, mitochondrion	55.69	53.62
AT3G55940.1	Thale cress	mitochondrion	52.17	53.42
CDY47356	Canola	mitochondrion	50.33	53.37
KRH14945	Soybean	mitochondrion	53.34	53.17
Bra032722.1-P	Field mustard	mitochondrion	50.0	53.11
VIT_08s0105g00300.t01	Wine grape	cytosol	48.66	52.81
Solyc06g051620.2.1	Tomato	cytosol, mitochondrion	49.5	52.39
PGSC0003DMT400078046	Potato	cytosol	38.46	52.04
PGSC0003DMT400049368	Potato	cytosol	51.34	51.51
AT5G58670.1	Thale cress	cytosol	48.16	51.34
CDY52120	Canola	cytosol, mitochondrion	47.83	51.16
CDY71238	Canola	cytosol	34.62	51.11
Os07t0694000-01	Rice	plasma membrane	51.0	51.0
CDX80344	Canola	cytosol	47.66	50.98
Solyc10g076710.1.1	Tomato	cytosol	51.0	50.75
Os12t0562400-00	Rice	plasma membrane	50.0	50.68
CDY02827	Canola	cytosol	44.65	50.66
Bra020361.1-P	Field mustard	cytosol	44.65	50.57
CDY32694	Canola	cytosol	44.48	50.47
Bra002627.1-P	Field mustard	cytosol	44.98	50.47
KRH72676	Soybean	cytosol, mitochondrion	31.44	50.0
VIT_06s0004g06670.t01	Wine grape	cytosol	47.66	49.05
Solyc06g082000.2.1	Tomato	cytosol	45.99	48.59
Os03t0289300-00	Rice	plasma membrane	51.67	48.36
KRH17039	Soybean	cytosol, mitochondrion	46.49	48.26
CDY65008	Canola	cytosol	28.09	48.14
CDY70829	Canola	cytosol	40.3	48.01
AT4G38530.1	Thale cress	cytosol	44.31	46.99
Bra006749.1-P	Field mustard	cytosol, mitochondrion	47.66	46.64
Bra033567.1-P	Field mustard	cytosol	41.3	46.6
CDX71156	Canola	cytosol, mitochondrion	47.49	46.48
CDY61028	Canola	cytosol, mitochondrion	47.49	46.48
CDY68902	Canola	cytosol	21.91	45.17

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	EntrezGene:4337686	MapMan:5.7.2.3.2
ProteinID:AAS90683.1	ProteinID:BAF16445.1	ProteinID:BAS92079.1	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:EEE62192.1
InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787
GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892
EnsemblPlantsGene:Os05g0127200	EnsemblPlants:Os05t0127200-01	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam
InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007
PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF104	UniProt:Q75IL8	SMART:SM00148	SMART:SM00149
SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI00003589CD	RefSeq:XP_015640813.1
SEG:seg	:	:	:	:	:

Description

PHOSPHOLIPASE C4Similar to Phospholipase C (Fragment). (Os05t0127200-01);Similar to Phospholipase C (Fragment). (Os05t0127200-02)

Coordinates

chr5:+:1535764..1541542

Molecular Weight (calculated)

67056.0 Da

IEP (calculated)

5.891

GRAVY (calculated)

-0.415

Length

598 amino acids

Sequence
(BLAST)

001: MTTYRVCCFL RRFRAASNEP SEELGDVFQA YADGGGGVMG EEALRRFLRE VQGEAAGGGD DELEATAREV MAFAAEQRLL RKGGAAAAGG GLTVEGFHRW
101: LCSDANAALD PQKRVYQDMG LPLSHYFIYT GHNSYLTGNQ LSSGCSEVPI VKALHDGVRV IELDLWPNAA KDAVEVLHGR TLTSPVGLMK CLEAIREYAF
201: VASPYPVILT LEDHLTPDLQ SKVAKMIKET FGDMLYVSET ENMAEFPSPD ELKGKIIVST KPPKEYLQTK NDADADEAGV WGEEITDDKV AATAMTTEEK
301: CAAAEEAVAA AAVDEEMQEA ETDKKTQHGV DNEYRRLIAI PLTRRKHDMD QDLKVDPDMV TRLSLGEKAY EKAIVTHGAH IIRFTQRKLL RIFPRSTRIT
401: SSNYNPLMGW RYGVQMVAAN MQGHGRKLWL TQGMFRANGG CGYVKKPDIL MNNDPDKLFD PTSKLPVKTR LKVTVYMGDG WRFDFRKTHF DKCSPPDFYA
501: RVGIAGVEAD TRMEQTKVKM DTWIPAWDHE FEFPLSVPEL ALLRVEVHES DNHQKDDFGG QTCLPVWELR RGIRSVRLCD HRGEPLRSVK LLMRFDFT

Best Arabidopsis Sequence Match ( AT3G08510.1 )
(BLAST)

001: MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PGDTVMKKTK
501: TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V

Arabidopsis Description

PLC2Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A178VDK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.