Factsheet for Solyc06g051620.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
plasma membrane 2
mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc07g065490.2.1
Solyc10g006000.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55940.1	Solyc07g065490.2.1	AT4G26630.1	25387881
AT3G55940.1	Solyc10g006000.2.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400016945	Potato	endoplasmic reticulum	80.53	92.11
Solyc05g052760.2.1	Tomato	plastid	72.57	70.33
VIT_13s0067g00900.t01	Wine grape	mitochondrion	70.44	67.12
KRH31148	Soybean	mitochondrion	69.03	65.88
KRG97732	Soybean	mitochondrion	67.96	64.86
CDY01144	Canola	cytosol	53.81	64.68
Bra029697.1-P	Field mustard	mitochondrion	64.25	64.36
AT3G08510.1	Thale cress	mitochondrion	65.49	63.68
Bra040049.1-P	Field mustard	cytosol	60.71	63.28
CDY35983	Canola	mitochondrion	65.31	63.08
CDY27998	Canola	cytosol	60.88	63.0
KRH73190	Soybean	endoplasmic reticulum	66.9	63.0
CDY22153	Canola	mitochondrion	64.6	62.82
CDY47356	Canola	mitochondrion	62.65	62.77
Bra032722.1-P	Field mustard	mitochondrion	62.48	62.7
KRH14945	Soybean	mitochondrion	66.55	62.67
Bra007201.1-P	Field mustard	mitochondrion	59.65	61.72
AT3G55940.1	Thale cress	mitochondrion	63.54	61.47
CDY70294	Canola	mitochondrion	59.29	61.36
CDY27254	Canola	mitochondrion	61.95	60.14
Solyc06g007120.2.1	Tomato	nucleus	62.48	60.14
CDX72188	Canola	mitochondrion	61.77	59.97
Solyc10g076710.1.1	Tomato	cytosol	61.77	58.07
GSMUA_Achr10P...	Banana	mitochondrion	52.57	57.56
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	57.52	54.81
Solyc06g082000.2.1	Tomato	cytosol	53.27	53.18
HORVU1Hr1G014570.19	Barley	mitochondrion	53.98	52.32
TraesCS1A01G069300.1	Wheat	mitochondrion	53.98	52.14
TraesCS1D01G071800.3	Wheat	mitochondrion	53.63	51.18
HORVU1Hr1G014580.9	Barley	mitochondrion	53.98	50.0
OQU77319	Sorghum	mitochondrion	53.1	49.83
Os05t0127200-01	Rice	plasma membrane	52.39	49.5
Zm00001d047447_P002	Maize	extracellular	52.04	44.21
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	57.35	36.65

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2
InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435
GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711
InterPro:IPR017946	InterPro:IPR035892	UniProt:K4C5V3	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388
PFAM:PF09279	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y
PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF92
SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695
EnsemblPlantsGene:Solyc06g051620.2	EnsemblPlants:Solyc06g051620.2.1	UniParc:UPI00027670CB	SEG:seg	:	:

Description

Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:K4C5V3]

Coordinates

chr6:-:35169806..35176840

Molecular Weight (calculated)

64274.4 Da

IEP (calculated)

5.341

GRAVY (calculated)

-0.511

Length

565 amino acids

Sequence
(BLAST)

001: MSKQTYKVGF FFRRQFTMAA AEAPADIKSL FKRYSDDSGV MSVQNLHSFL IEIQKEKNVS LENAEAIINN HGGDSKQKGL QLDGFFKFLF SDVNPPLDPK
101: LGIHHDMTAP LSHYYIYTGH NSYLTGNQLS SDCSDVPIIQ ALQRSVRVIE LDIWPNSDKD DIEVLHGRTL TAPVTLIKCL RSIKEHAFCA SEYPLVITLE
201: DHLTPDLQEK VAEMITQTFG EMLFSPSESL KELPSPESLR KRVMISTKPP KEYLKSKEVK EKDDTKKEAE NVFQQDDVDE EEDEDDEEDS KSDKKAASEY
301: KRLIAIHAGK GKGGLSDWLR VDLNKVRRLS LSEPELEKAV DTHAKEIIRF TQHNLLRIYP KGIRVDSSNY DPFVGWMHGA QMVAFNMQGY GRSLWLMHGM
401: FRANGGCGYV KKPDLLLKAG PDNEVFDPTA NLPVKTTLKV TVYMGDGWDK DFDQTDFDTY SPPDFYAKLG IAGVPADEVK KRTETIDDNW IPSWNEQFEF
501: PLTVPELALL RIKVLDYNLS DKDEFAGQTC LPVAELRQGI RAVPLYDRKG EKYSSVKLLM HFEFK

Best Arabidopsis Sequence Match ( AT3G08510.1 )
(BLAST)

001: MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PGDTVMKKTK
501: TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V

Arabidopsis Description

PLC2Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A178VDK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.