Factsheet for Solyc06g082000.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078046	Potato	cytosol	65.55	83.94
KRH72676	Soybean	cytosol, mitochondrion	36.75	55.32
Solyc06g051620.2.1	Tomato	cytosol, mitochondrion	53.18	53.27
Solyc06g007120.2.1	Tomato	nucleus	54.95	52.98
Solyc05g052760.2.1	Tomato	plastid	54.24	52.66
KRH17039	Soybean	cytosol, mitochondrion	53.18	52.26
GSMUA_Achr10P...	Banana	mitochondrion	46.64	51.16
CDY52120	Canola	cytosol, mitochondrion	50.35	50.98
AT5G58670.1	Thale cress	cytosol	50.53	50.98
CDY71238	Canola	cytosol	36.4	50.86
VIT_06s0004g06670.t01	Wine grape	cytosol	52.12	50.77
CDX80344	Canola	cytosol	49.82	50.45
CDY70829	Canola	cytosol	44.7	50.4
CDY02827	Canola	cytosol	46.82	50.28
Bra002627.1-P	Field mustard	cytosol	47.17	50.09
AT4G38530.1	Thale cress	cytosol	49.65	49.82
Solyc10g076710.1.1	Tomato	cytosol	52.83	49.75
CDY32694	Canola	cytosol	46.29	49.72
CDY68902	Canola	cytosol	25.44	49.66
Bra020361.1-P	Field mustard	cytosol	46.29	49.62
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	51.06	48.74
HORVU1Hr1G014570.19	Barley	mitochondrion	50.18	48.71
CDY65008	Canola	cytosol	30.04	48.71
Bra033567.1-P	Field mustard	cytosol	45.58	48.68
TraesCS1A01G069300.1	Wheat	mitochondrion	49.65	48.03
TraesCS1D01G071800.3	Wheat	mitochondrion	49.82	47.64
Bra006749.1-P	Field mustard	cytosol, mitochondrion	50.18	46.48
CDX71156	Canola	cytosol, mitochondrion	50.0	46.32
CDY61028	Canola	cytosol, mitochondrion	49.82	46.15
HORVU1Hr1G014580.9	Barley	mitochondrion	49.65	46.07
OQU77319	Sorghum	mitochondrion	48.94	46.01
Os05t0127200-01	Rice	plasma membrane	48.59	45.99
Zm00001d047447_P002	Maize	extracellular	48.76	41.5
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	49.29	31.56

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2
UniProt:B6C9K0	InterPro:C2_dom	InterPro:C2_domain_sf	EMBL:EU099595	GO:GO:0003674	GO:GO:0003824
GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629
GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909
InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388
PFAM:PF09279	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y
PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF92
SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF51695	EnsemblPlantsGene:Solyc06g082000.2
EnsemblPlants:Solyc06g082000.2.1	UniParc:UPI00018179F7	:	:	:	:

Description

Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:B6C9K0]

Coordinates

chr6:+:47953033..47956274

Molecular Weight (calculated)

64755.6 Da

IEP (calculated)

7.778

GRAVY (calculated)

-0.422

Length

566 amino acids

Sequence
(BLAST)

001: MSNGKQHFQV CFCWSRVFKV RGGEIPEDIK KVFESYSMND TMSMDGLISF LKKEQNEVIN VNTKAQNVFN SLKHLNKFHR RGLTLEAFFK FLVGEHNFAH
101: QSKVHQNMDA PLAHYYIYTG HNSYLTGNQL SSDCSIEPIK KALKKGVRVI ELDLWPDITK DDINVRHGGT LTTPVKLIKC LKAIKEDAFS FSEYPVILTF
201: EDHLHPYPHL QEKVAQMVKS TFGSMLFIPK SDMDVFPSPN QLVKRILIST KPPTEDSPSE SDNKVSPERG RSENGLNNHN QQIQLEEGDE DEVPKYRDLI
301: AIHATKHKGS MENFGSHGSS DKVGRCSMNE LALEAAVAEH SHQLIRFTQR NILRVYPKGA RFTSSNYDPL IAWLRGAQMV AFNMQGYDRF LWMMQGFFRA
401: NGGCGYVKKP EFLLSSDGLC DEVFNSMALP VKKTLKVKIY MGDGWRADFH FRHFDYCSPP DFYVRVGMVG VPADACNMRK TKTVNDQWVP IWNDDVEFEF
501: PIRVLELALL RIDVKDYDPS GEDEFAGQTC LPVSELKTGI RCVPLYNRKG DAYRSVKLLM RFDFTT

Best Arabidopsis Sequence Match ( AT5G58670.1 )
(BLAST)

001: MKESFKVCFC CVRNFKVKSS EPPEEIKNLF HDYSQDDRMS ADEMLRFVIQ VQGETHADIN YVKDIFHRLK HHGVFHPRGI HLEGFYRYLL SDFNSPLPLT
101: REVWQDMNQP LSHYFLYTGH NSYLTGNQLN SNSSIEPIVK ALRNGVRVIE LDLWPNSSGK EAEVRHGGTL TSREDLQKCL NVVKENAFQV SAYPVVLTLE
201: DHLTPILQKK VAKMVSKTFG GSLFQCTDET TECFPSPESL KNKILISTKP PKEYLQTQIS KGSTTDESTR AKKISDAEEQ VQEEDEESVA IEYRDLISIH
301: AGNRKGGLKN CLNGDPNRVI RLSMSEQWLE TLAKTRGPDL VKFTQRNLLR IFPKTTRFDS SNYDPLVGWI HGAQMVAFNM QSHGRYLWMM QGMFKANGGC
401: GYVKKPDVLL SNGPEGEIFD PCSQNLPIKT TLKVKIYTGE GWNMDFPLDH FDRYSPPDFY AKVGIAGVPL DTASYRTEID KDEWFPIWDK EFEFPLRVPE
501: LSLLCITVKD YDSNTQNDFA GQTCFPLSEV RPGIRAVRLH DRAGEVYKHV RLLMRFVLEP R

Arabidopsis Description

PLC1Phosphoinositide phospholipase C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39032]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.