CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72676	Soybean	cytosol, mitochondrion	58.85	90.16
VIT_06s0004g06670.t01	Wine grape	cytosol	56.08	55.59
KRH31148	Soybean	mitochondrion	55.9	54.39
AT5G58670.1	Thale cress	cytosol	52.95	54.37
CDY71238	Canola	cytosol	38.02	54.07
KRG97732	Soybean	mitochondrion	55.56	54.05
KRG97734	Soybean	cytosol	51.91	53.68
KRH14945	Soybean	mitochondrion	55.9	53.67
Bra020361.1-P	Field mustard	cytosol	49.13	53.6
CDY02827	Canola	cytosol	48.96	53.51
CDX80344	Canola	cytosol	51.91	53.49
KRH73190	Soybean	endoplasmic reticulum	55.56	53.33
Solyc06g082000.2.1	Tomato	cytosol	52.26	53.18
CDY32694	Canola	cytosol	48.61	53.13
CDY52120	Canola	cytosol, mitochondrion	51.56	53.13
Bra002627.1-P	Field mustard	cytosol	49.13	53.1
CDY70829	Canola	cytosol	46.18	52.99
PGSC0003DMT400078046	Potato	cytosol	40.62	52.94
AT4G38530.1	Thale cress	cytosol	51.56	52.66
CDY65008	Canola	cytosol	31.25	51.58
GSMUA_Achr10P...	Banana	mitochondrion	46.01	51.36
KRH14947	Soybean	cytosol, mitochondrion	52.78	51.01
Bra033567.1-P	Field mustard	cytosol	46.88	50.94
CDY68902	Canola	cytosol	25.35	50.34
KRH73189	Soybean	cytosol	52.6	50.17
CDX71156	Canola	cytosol, mitochondrion	52.26	49.26
Bra006749.1-P	Field mustard	cytosol, mitochondrion	52.26	49.26
KRH31146	Soybean	nucleus	51.91	49.02
CDY61028	Canola	cytosol, mitochondrion	51.91	48.94
TraesCS1A01G069300.1	Wheat	mitochondrion	48.96	48.21
HORVU1Hr1G014570.19	Barley	mitochondrion	48.78	48.2
TraesCS1D01G071800.3	Wheat	mitochondrion	49.31	47.97
Os05t0127200-01	Rice	plasma membrane	48.26	46.49
HORVU1Hr1G014580.9	Barley	mitochondrion	49.13	46.39
KRH14948	Soybean	cytosol	47.92	45.77
OQU77319	Sorghum	mitochondrion	47.74	45.68
KRH31144	Soybean	cytosol	45.83	45.28
KRH73188	Soybean	cytosol	46.18	44.78
KRG97735	Soybean	cytosol	47.4	43.89
Zm00001d047447_P002	Maize	extracellular	47.22	40.9
KRH14952	Soybean	cytosol	26.22	38.82

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	EntrezGene:100817915	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2
EMBL:ACUP02009041	InterPro:C2_dom	InterPro:C2_domain_sf	ncoils:Coil	InterPro:EF-hand-dom_pair	EnsemblPlantsGene:GLYMA_14G193800
GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556
UniProt:I1MBB2	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892
EnsemblPlants:KRH17039	ProteinID:KRH17039	ProteinID:KRH17039.1	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388
InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004
PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF105	MetaCyc:PWY-6351	MetaCyc:PWY-6367
MetaCyc:PWY-7039	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562
SUPFAM:SSF51695	UniParc:UPI000233ACA0	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:45860185..45866449

Molecular Weight (calculated)

66387.0 Da

IEP (calculated)

6.905

GRAVY (calculated)

-0.515

Length

576 amino acids

Sequence
(BLAST)

001: MATTSRHPSR NKTPKQHFKV CFCFRRMFRL KGTEPPDEIN TVFEEYSLDG IMSMHDLGNF LVHFQGEEEG DSINKHAQTI FDSLKHLNIF HRKGIHVEAF
101: FRYLLSDLNG PLAEVHHDMK FPLAHYFLYT GHNSYLTGNQ VSSASSTSAI IKALKKGVRV IELDLWPNSR GDDVLVHHGG TLTSSVKLKA CLKAINDYAF
201: FASPYPVVIT FEDHITQFLQ AKVAQMVDDI FGDILFRPEY SQQMTQFPSP EQLKGKILIS TKPPESPESQ DQRVREEAHR LEYDDDRTRV NYKDDLEEQE
301: EEDDTLEYRD LISIRAGKPK GKLRNWLIDH EQVRRLSLSE QELEDIAKNH GTDIVRFTQR NLLRIYPKGT RLDSSNYDPM IGWMHGAQMV AFNMQGGGHH
401: LRYMEGMFRA NGGCGYVKKP DILLNVGPNN EVFDPRTIRP VQKILQVLVY MGEGWRSDFG PTHFDFYSPP DFRVKVGIHG VPADKDTKYT RTVEDDWVPV
501: WNEEFSFPLT VPELALLYIK VVERDFSGRH DFGGQTCLPV SELRQGIRAV RLRNRRGELY KSVRLLIQFH FADSTA

Best Arabidopsis Sequence Match ( AT5G58670.1 )
(BLAST)

001: MKESFKVCFC CVRNFKVKSS EPPEEIKNLF HDYSQDDRMS ADEMLRFVIQ VQGETHADIN YVKDIFHRLK HHGVFHPRGI HLEGFYRYLL SDFNSPLPLT
101: REVWQDMNQP LSHYFLYTGH NSYLTGNQLN SNSSIEPIVK ALRNGVRVIE LDLWPNSSGK EAEVRHGGTL TSREDLQKCL NVVKENAFQV SAYPVVLTLE
201: DHLTPILQKK VAKMVSKTFG GSLFQCTDET TECFPSPESL KNKILISTKP PKEYLQTQIS KGSTTDESTR AKKISDAEEQ VQEEDEESVA IEYRDLISIH
301: AGNRKGGLKN CLNGDPNRVI RLSMSEQWLE TLAKTRGPDL VKFTQRNLLR IFPKTTRFDS SNYDPLVGWI HGAQMVAFNM QSHGRYLWMM QGMFKANGGC
401: GYVKKPDVLL SNGPEGEIFD PCSQNLPIKT TLKVKIYTGE GWNMDFPLDH FDRYSPPDFY AKVGIAGVPL DTASYRTEID KDEWFPIWDK EFEFPLRVPE
501: LSLLCITVKD YDSNTQNDFA GQTCFPLSEV RPGIRAVRLH DRAGEVYKHV RLLMRFVLEP R

Arabidopsis Description

PLC1Phosphoinositide phospholipase C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39032]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.