CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14948	Soybean	cytosol	73.01	47.1
CDY69947	Canola	cytosol	25.19	46.89
KRH73188	Soybean	cytosol	69.15	45.29
KRH31144	Soybean	cytosol	50.64	33.79
KRG97734	Soybean	cytosol	48.07	33.57
KRH72676	Soybean	cytosol, mitochondrion	31.88	32.98
KRH14947	Soybean	cytosol, mitochondrion	49.61	32.38
KRH73189	Soybean	cytosol	49.61	31.95
KRG97735	Soybean	cytosol	50.13	31.35
VIT_13s0067g00890.t01	Wine grape	cytosol	47.3	31.08
KRH31146	Soybean	nucleus	48.33	30.82
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	45.76	30.12
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	45.5	29.85
CDY07057	Canola	cytosol	44.47	28.36
AT2G40116.1	Thale cress	cytosol	44.47	28.22
CDY60344	Canola	cytosol	43.44	28.17
Bra000168.1-P	Field mustard	cytosol	43.44	27.89
CDY61706	Canola	cytosol	43.7	27.87
CDY20520	Canola	cytosol	43.44	27.8
Bra004987.1-P	Field mustard	cytosol	43.44	27.75
CDY07623	Canola	cytosol	42.42	27.73
KRH73190	Soybean	endoplasmic reticulum	42.67	27.67
CDX74806	Canola	cytosol	42.42	27.5
KRH14945	Soybean	mitochondrion	41.9	27.17
KRH31148	Soybean	mitochondrion	40.87	26.86
Bra017030.1-P	Field mustard	cytosol	41.13	26.8
KRG97732	Soybean	mitochondrion	40.62	26.69
KRH17039	Soybean	cytosol, mitochondrion	38.82	26.22
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	44.73	19.68
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	44.47	19.57

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	UniProt:A0A0R0GIK6	EMBL:ACUP02008546
EnsemblPlantsGene:GLYMA_14G059700	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556
InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	EnsemblPlants:KRH14952	ProteinID:KRH14952	ProteinID:KRH14952.1
PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y
PRINTS:PR00390	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF101	MetaCyc:PWY-6351
MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00148	SMART:SM00149	SUPFAM:SSF51695	UniParc:UPI0006EDEDB5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:4825060..4827766

Molecular Weight (calculated)

44631.1 Da

IEP (calculated)

8.327

GRAVY (calculated)

-0.637

Length

389 amino acids

Sequence
(BLAST)

001: MEAYSKFTGG GSYMSAKQLH RFLVEHQGAK DHTLTDLEKV VEKVLQVRKT CQEIINVDQN REQQITHDEL FHFLLHDDFN GPLIAKSFIF ATCPSFLCFS
101: FRLILLKANN NLSPGHNSYL TGNQLSSDCS EEPIIKALKR GVHVIELDLW PTFNKDDIKD NKDCSTLNES ESSEEESKGK ESLNSSRKKV ETEDTLNDSD
201: RDEGNHYSPD YKRIITIRNR KLKGCLKDKL KTDGELRRQS WSETTHEKAS ESHGTDIVRF TQKNILRVYP RAMRVKSSNL KPHIGWMYGV QMVAFNMQGH
301: GKSLWLMQGM FRANGGCGYV KKPQILMQKH QCGNEFDPTW ILTVKKTLKV KVYTGHGWSL DFSLSSTHFD NCSPPDFYTE VSWIILGKH

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.