Factsheet for AT2G40116.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69947	Canola	cytosol	31.65	92.82
CDY60344	Canola	cytosol	90.54	92.5
CDY07623	Canola	cytosol	89.23	91.93
Bra000168.1-P	Field mustard	cytosol	90.86	91.91
CDY61706	Canola	cytosol	91.03	91.48
CDY07057	Canola	cytosol	90.86	91.31
CDX74806	Canola	cytosol	89.23	91.17
CDY20520	Canola	cytosol	90.05	90.79
Bra004987.1-P	Field mustard	cytosol	90.05	90.64
Bra017030.1-P	Field mustard	cytosol	88.09	90.45
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	63.78	66.16
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	63.78	65.94
KRG97734	Soybean	cytosol	59.38	65.35
VIT_13s0067g00890.t01	Wine grape	cytosol	61.5	63.68
KRH14947	Soybean	cytosol, mitochondrion	60.2	61.91
KRH73189	Soybean	cytosol	59.87	60.76
KRH31146	Soybean	nucleus	58.73	59.02
AT3G08510.1	Thale cress	mitochondrion	54.49	57.49
AT5G58700.3	Thale cress	cytosol	55.46	56.95
KRH14948	Soybean	cytosol	54.65	55.56
AT3G55940.1	Thale cress	mitochondrion	52.85	55.48
KRH73188	Soybean	cytosol	53.34	55.05
AT5G58690.1	Thale cress	cytosol	51.22	54.33
KRH31144	Soybean	cytosol	50.73	53.34
KRG97735	Soybean	cytosol	51.55	50.8
AT5G58670.1	Thale cress	cytosol	45.51	49.73
AT4G38530.1	Thale cress	cytosol	44.37	48.23
KRH14952	Soybean	cytosol	28.22	44.47
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	62.15	43.1
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	61.83	42.87
AT3G47220.1	Thale cress	cytosol	36.87	42.56
AT3G47290.2	Thale cress	cytosol	35.89	38.39

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	EntrezGene:818602
ProteinID:AAN75042.1	ProteinID:AEC09783.1	ArrayExpress:AT2G40116	EnsemblPlantsGene:AT2G40116	RefSeq:AT2G40116	TAIR:AT2G40116
RefSeq:AT2G40116-TAIR-G	EnsemblPlants:AT2G40116.1	TAIR:AT2G40116.1	Unigene:At.50126	EMBL:BX819512	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909
InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	RefSeq:NP_850327.2	PFAM:PF00168	PFAM:PF00387
PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390
PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF101	UniProt:Q8GV43
SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695
UniParc:UPI000034EE4D	SEG:seg	:	:	:	:

Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]

Coordinates

chr2:+:16751561..16754599

Molecular Weight (calculated)

70042.1 Da

IEP (calculated)

6.185

GRAVY (calculated)

-0.568

Length

613 amino acids

Sequence
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.