Factsheet for PGSC0003DMT400016940

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 2
plasma membrane 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	96.95	96.63
CDY69947	Canola	cytosol	23.69	66.99
VIT_13s0067g00890.t01	Wine grape	cytosol	65.65	65.54
KRG97734	Soybean	cytosol	61.08	64.81
CDY07623	Canola	cytosol	65.14	64.71
CDY60344	Canola	cytosol	65.48	64.5
CDY61706	Canola	cytosol	66.5	64.43
CDY07057	Canola	cytosol	66.16	64.1
Bra000168.1-P	Field mustard	cytosol	65.48	63.86
AT2G40116.1	Thale cress	cytosol	66.16	63.78
CDX74806	Canola	cytosol	64.64	63.67
CDY20520	Canola	cytosol	65.14	63.32
Bra004987.1-P	Field mustard	cytosol	64.97	63.05
Bra017030.1-P	Field mustard	cytosol	63.62	62.98
KRH14947	Soybean	cytosol, mitochondrion	62.77	62.25
PGSC0003DMT400016945	Potato	endoplasmic reticulum	50.76	60.73
KRH73189	Soybean	cytosol	61.76	60.43
PGSC0003DMT400069760	Potato	mitochondrion	58.71	59.32
KRH31146	Soybean	nucleus	60.58	58.69
PGSC0003DMT400049368	Potato	cytosol	58.04	57.55
KRH14948	Soybean	cytosol	57.53	56.38
KRH31144	Soybean	cytosol	53.64	54.37
KRH73188	Soybean	cytosol	54.31	54.04
PGSC0003DMT400078046	Potato	cytosol	38.92	52.04
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	77.67	51.92
KRG97735	Soybean	cytosol	54.48	51.77
KRH14952	Soybean	cytosol	30.12	45.76

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042
GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946
InterPro:IPR035892	UniProt:M1A8D0	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	EnsemblPlantsGene:PGSC0003DMG400006621
PGSC:PGSC0003DMG400006621	EnsemblPlants:PGSC0003DMT400016940	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y
PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF101
SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695
UniParc:UPI000294C47C	SEG:seg	:	:	:	:

Description

PI-phospholipase C PLC5 [Source:PGSC_GENE;Acc:PGSC0003DMG400006621]

Coordinates

chr6:+:26382919..26386728

Molecular Weight (calculated)

68015.2 Da

IEP (calculated)

7.349

GRAVY (calculated)

-0.588

Length

591 amino acids

Sequence
(BLAST)

001: MGSSYNYYRM FGCFNRKFKI RETEPPPDVR DAFFRYTGKG IQMNADQLLR YLVEVQGEEG CTIKDAEQII QHVASRRHHL IRRLNHSLEL DDFFFYLFQD
101: DLNGAIKSQV HHDMTAPLQH YFIYTGHNSY LTGNQLSSDC SEIPIVKALE RGVRGIELDL WPSSGKDNIH VLHGRTLTTP VPLLKCLKAI RDHAFVKSPY
201: PVIITLEDHL TPDLQAKVAE MVIQIFGEML YYPQSECLEE FPSPEGLKNR IILSTKPPKE YLESKNQRDT SPVGKDSFRE DLLKKEKSEI GAEDHDTDER
301: SDSDQDDEDG DTSNDQQSSQ PGAPKYKSLI AVHAGKAKHG LKRALREENN KVSRLSLSEQ EVVRAAENYG TDLVRFTQKN ILRVYPKGTR VTSSNFKPMT
401: GWMHGAQMVA FNMQGYGKSL WMMHGMFRSN GSCGYVKKPQ FLMDIGPHNE VFDPKVKLPV KKTLQVRVYM GDGWRLDFSH THFDAYSPPD FYTKLYLVGV
501: PADTRKKKTR ILEDDWCPVW DEEFNFPLTV PELALLRIEV REYDMSEKDD FGGQTCLPVS ELRTGIRSVP LYDKKGHKMK SVRLLMRFQF L

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.