Factsheet for PGSC0003DMT400031174

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	95.14	95.14
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	51.92	77.67
KRG97734	Soybean	cytosol	40.16	63.73
CDY07623	Canola	cytosol	42.65	63.36
CDY60344	Canola	cytosol	42.87	63.17
VIT_13s0067g00890.t01	Wine grape	cytosol	42.08	62.84
CDY69947	Canola	cytosol	14.82	62.68
Bra000168.1-P	Field mustard	cytosol	42.87	62.54
CDX74806	Canola	cytosol	41.97	61.83
AT2G40116.1	Thale cress	cytosol	42.87	61.83
CDY20520	Canola	cytosol	42.42	61.68
CDY61706	Canola	cytosol	42.53	61.64
CDY07057	Canola	cytosol	42.53	61.64
Bra004987.1-P	Field mustard	cytosol	42.31	61.41
PGSC0003DMT400016945	Potato	endoplasmic reticulum	34.28	61.34
KRH14947	Soybean	cytosol, mitochondrion	41.18	61.07
Bra017030.1-P	Field mustard	cytosol	41.06	60.8
KRH73189	Soybean	cytosol	41.18	60.26
KRH31146	Soybean	nucleus	40.38	58.52
PGSC0003DMT400069760	Potato	mitochondrion	38.12	57.61
PGSC0003DMT400049368	Potato	cytosol	38.24	56.71
KRH14948	Soybean	cytosol	36.76	53.9
KRH31144	Soybean	cytosol	35.07	53.17
KRH73188	Soybean	cytosol	35.07	52.19
PGSC0003DMT400078046	Potato	cytosol	25.45	50.91
KRG97735	Soybean	cytosol	35.41	50.32
KRH14952	Soybean	cytosol	19.57	44.47

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	EntrezGene:102603424	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2
InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435
GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711
InterPro:IPR017946	InterPro:IPR035892	UniProt:M1AVA1	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388
PFAM:PF09279	EnsemblPlantsGene:PGSC0003DMG400011937	PGSC:PGSC0003DMG400011937	EnsemblPlants:PGSC0003DMT400031174	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl
InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007
PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF101	SMART:SM00148	SMART:SM00149	SMART:SM00239
SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI0002961F6F	RefSeq:XP_006356459.1	SEG:seg

Description

1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase [Source:PGSC_GENE;Acc:PGSC0003DMG400011937]

Coordinates

chr3:+:35189622..35196579

Molecular Weight (calculated)

100551.0 Da

IEP (calculated)

6.720

GRAVY (calculated)

-0.799

Length

884 amino acids

Sequence
(BLAST)

001: MGSYNYYKVL GCFNRKFKIS ETGPPPDVSN AFSLYTEKGS HMTGDQLGRF MVDYQGEKEC TINDAEQIIQ EVVNRRHHLT KYTKNAHSFE LEDFFYYLFQ
101: DDLNAPIKSQ VHHDMNAPLQ HYFIYTGHNS YLTGNQLSSD CSEIPIIRAL ERGVRGIELD LWPNSAKDNV HVLHGRTLTT PVPLLTCLRS IRDHAFIKSP
201: YPVMITLEDH LTPDLQAKVA EAVIQVFGEM LYYPRSECLE EFPSPEELKH RIILSTKPPK EYLESKHHRD IESASPAKKD SVEGDILGKE PSEVKTEGHE
301: ANYKNDTDQD DKDGGTSNYQ ASEQGAPHYK RLTAINAGKA NSELKHELIP EELKHQTVHA TKSPREDPDL KHAREKENAT MARKDAVERD VLVKDTPEII
401: VKEREADERK VMDQDDKDSD PSNHRSSQLG GPQYKRMVAM HAGKANYDLN NAQIPEELKN GTPLSPKPPK EYVESKHQKD RESASPVRKD SFGNDLLVKE
501: TSEIKAKHEA HEGSDIDQDD LGSDHFDCRS SQQGAPQYKR LVAINAGKAE CGSRNSSTPQ ELKHHRSRER NSLQDLLVKD TSKILDEGHE TDERSDTDQD
601: DEDNDTSNNQ SSQKGAPQYK RLIAIRAGKA KHGVKLALTD EVIKFNRLSL DEHALEKAAT NHGKDLVRFT QRNILRVFPK GTRVTSSNFK PMIGWMHGAQ
701: MVAFNMQGYG KSLWIMHGMF RSNGGCGYVR KPSFLMERGP YNELFDPKVT LPVKKTLRVR VYLGDGWRMD FSHTHFDAFS PPDFYTKLYI IGVPADAAKS
801: KTRIIEDDWG PIWGEEFKFP LTVPELALLR IEVREYDMSD KDDFGGQTCL PVSELRPGIR AVPLYDKKGE KLKSVRLLMQ FRFI

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.