CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74806	Canola	cytosol	97.86	99.17
CDY60344	Canola	cytosol	91.28	92.5
CDY07623	Canola	cytosol	89.8	91.76
AT2G40116.1	Thale cress	cytosol	90.79	90.05
CDY69947	Canola	cytosol	30.59	89.0
CDY07057	Canola	cytosol	88.82	88.52
CDY61706	Canola	cytosol	88.65	88.36
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	63.32	65.14
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	63.16	64.76
KRG97734	Soybean	cytosol	58.88	64.27
VIT_13s0067g00890.t01	Wine grape	cytosol	60.69	62.33
CDY01144	Canola	cytosol	46.88	60.64
KRH14947	Soybean	cytosol, mitochondrion	59.21	60.4
KRH73189	Soybean	cytosol	58.88	59.27
CDY71544	Canola	cytosol	47.04	58.73
CDY27998	Canola	cytosol	52.47	58.42
KRH31146	Soybean	nucleus	58.55	58.36
CDY52122	Canola	cytosol, mitochondrion	56.41	58.23
CDX80341	Canola	mitochondrion	56.41	58.14
CDY70294	Canola	mitochondrion	51.48	57.33
CDY22153	Canola	mitochondrion	54.61	57.14
CDY35983	Canola	mitochondrion	54.28	56.41
CDY32691	Canola	cytosol	54.93	56.23
CDY47356	Canola	mitochondrion	52.14	56.21
CDY27254	Canola	mitochondrion	53.45	55.84
CDX72188	Canola	mitochondrion	52.96	55.33
KRH14948	Soybean	cytosol	54.28	54.73
KRH73188	Soybean	cytosol	53.29	54.55
KRH31144	Soybean	cytosol	50.66	52.83
CDY52121	Canola	cytosol	50.0	51.61
CDX80342	Canola	cytosol	49.84	51.44
KRG97735	Soybean	cytosol	51.32	50.16
CDY65008	Canola	cytosol	28.45	49.57
CDY52120	Canola	cytosol, mitochondrion	44.24	48.12
CDX80344	Canola	cytosol	44.24	48.12
CDY70829	Canola	cytosol	39.31	47.61
CDY02827	Canola	cytosol	40.79	47.06
CDY32694	Canola	cytosol	40.62	46.87
CDY71238	Canola	cytosol	31.09	46.67
CDX75008	Canola	cytosol	12.5	43.93
CDX71156	Canola	cytosol, mitochondrion	44.08	43.86
CDY61028	Canola	cytosol, mitochondrion	44.08	43.86
CDY68902	Canola	cytosol	20.89	43.79
KRH14952	Soybean	cytosol	27.8	43.44
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	62.17	42.76
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	61.68	42.42
CDY33201	Canola	cytosol	8.88	42.19
CDY26989	Canola	cytosol, plastid	10.86	33.33
CDY26990	Canola	cytosol	4.44	18.75

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	GO:A0A078G1Z6
UniProt:A0A078G1Z6	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDY20520	ProteinID:CDY20520	ProteinID:CDY20520.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556
EnsemblPlantsGene:GSBRNA2T00012632001	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892
PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom
InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336
PANTHER:PTHR10336:SF101	MetaCyc:PWY-6351	MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00148	SMART:SM00149
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI0004EEA9EF	SEG:seg	:

Description

BnaC04g05240DPhosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A078G1Z6]

Coordinates

chrLK032108:+:677794..681007

Molecular Weight (calculated)

69237.1 Da

IEP (calculated)

6.111

GRAVY (calculated)

-0.518

Length

608 amino acids

Sequence
(BLAST)

001: MGKEKKTESY DNGSYNYKMF KCFNRKFKIN EVQPTDDVRD AFCQFAVGCG GGGGDGDSSD GDASSGVMGA EQLYSGTTVA EAQRLINEVI RRRHHVTRFT
101: RHGLDLDDFF NFLFYDDLNP PITPHVHQDM SAPLSHYFIY TGHNSYLTGN QLSSDCSEVP VIKALQRGVR VIELDLWPNS TGTDINVLHG RTLTTPVPLI
201: SCLKAIRDYA FSSSPYPVII TLEDHLTADL QAKVAEMATL IFGEMLYYPE SESLAEFPSP ASLLHRIMIS TKPPKEYLES SNPIVKQKDN NNASPSSEEE
301: TPRKEEIQTL ESILFYEDCC ENKNDSDQEE EEASEEQKPA YKRLITIHAG KPKGTVKEEM KVVVDKVRRL SLSEQELDRT CSSNSQDVVR FTQRNILRIY
401: PKGTRFNSSN YKPLIGWIHG AQMIAFNMQG YGKSLWLMHG MFRANGGCGY VKKPNFLMKK GFHDEVFDPR KKIPVKETMA FNVKVYMGDG WRLDFSHTHF
501: DSYSPPDFYT KVYVVGVPAD NAKRKTRVIE DNWYPIWDEE FSFPLTVPEL ALLRIEVSEY DMSDKDDFGG QTCLPVSELR PGIRSVPLYD KKGEKMKSVK
601: LLMRFIFE

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.