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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004987.1-P Field mustard cytosol 99.33 97.87
CDY20520 Canola cytosol 99.17 97.86
CDY60344 Canola cytosol 92.33 92.33
CDY07623 Canola cytosol 90.83 91.6
AT2G40116.1 Thale cress cytosol 91.17 89.23
CDY07057 Canola cytosol 89.17 87.7
CDY61706 Canola cytosol 89.0 87.54
CDY69947 Canola cytosol 30.33 87.08
PGSC0003DMT400016940 Potato cytosol, mitochondrion 63.67 64.64
Solyc06g051630.2.1 Tomato cytosol, mitochondrion 63.5 64.25
KRG97734 Soybean cytosol 59.0 63.55
VIT_13s0067g00890.t01 Wine grape cytosol 61.17 61.99
CDY01144 Canola cytosol 47.17 60.21
KRH14947 Soybean cytosol, mitochondrion 59.67 60.07
KRH73189 Soybean cytosol 59.67 59.27
CDY71544 Canola cytosol 47.5 58.52
CDY52122 Canola cytosol, mitochondrion 56.83 57.89
CDY27998 Canola cytosol 52.67 57.88
CDX80341 Canola mitochondrion 56.83 57.8
KRH31146 Soybean nucleus 58.67 57.7
CDY70294 Canola mitochondrion 51.67 56.78
CDY22153 Canola mitochondrion 54.83 56.63
CDY32691 Canola cytosol 55.5 56.06
CDY35983 Canola mitochondrion 54.5 55.9
CDY47356 Canola mitochondrion 52.33 55.67
CDY27254 Canola mitochondrion 53.67 55.33
CDX72188 Canola mitochondrion 53.17 54.81
KRH14948 Soybean cytosol 54.5 54.23
KRH73188 Soybean cytosol 53.5 54.04
KRH31144 Soybean cytosol 51.17 52.66
CDY52121 Canola cytosol 50.83 51.78
CDX80342 Canola cytosol 50.67 51.61
KRG97735 Soybean cytosol 51.83 50.0
CDY65008 Canola cytosol 28.67 49.28
CDX80344 Canola cytosol 44.67 47.94
CDY52120 Canola cytosol, mitochondrion 44.5 47.76
CDY70829 Canola cytosol 39.5 47.21
CDY02827 Canola cytosol 41.17 46.87
CDY32694 Canola cytosol 41.17 46.87
CDY71238 Canola cytosol 31.5 46.67
CDX75008 Canola cytosol 12.67 43.93
CDY61028 Canola cytosol, mitochondrion 44.33 43.54
CDY68902 Canola cytosol 21.0 43.45
CDX71156 Canola cytosol, mitochondrion 44.17 43.37
CDY33201 Canola cytosol 9.17 42.97
KRH14952 Soybean cytosol 27.5 42.42
Solyc03g096070.2.1 Tomato cytosol, mitochondrion 62.33 42.31
PGSC0003DMT400031174 Potato cytosol, mitochondrion 61.83 41.97
CDY26989 Canola cytosol, plastid 10.83 32.83
CDY26990 Canola cytosol 4.5 18.75
Protein Annotations
KEGG:00562+3.1.4.11KEGG:04070+3.1.4.11Gene3D:2.60.40.150Gene3D:3.20.20.190MapMan:5.7.2.3.2GO:A0A078CCJ0
InterPro:C2_domInterPro:C2_domain_sfEnsemblPlants:CDX74806ProteinID:CDX74806ProteinID:CDX74806.1GO:GO:0003674
GO:GO:0003824GO:GO:0004435GO:GO:0006629GO:GO:0007154GO:GO:0007165GO:GO:0008081
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0035556EnsemblPlantsGene:GSBRNA2T00116780001
InterPro:IPR000008InterPro:IPR000909InterPro:IPR001711InterPro:IPR017946InterPro:IPR035892PFAM:PF00168
PFAM:PF00387PFAM:PF00388InterPro:PI-PLC_famInterPro:PLC-like_Pdiesterase_TIM-brlInterPro:PLipase_C_PInositol-sp_X_domInterPro:PLipase_C_Pinositol-sp_Y
PRINTS:PR00390PFscan:PS50004PFscan:PS50007PFscan:PS50008PANTHER:PTHR10336PANTHER:PTHR10336:SF101
MetaCyc:PWY-6351MetaCyc:PWY-6367MetaCyc:PWY-7039SMART:SM00148SMART:SM00149SMART:SM00239
SUPFAM:SSF49562SUPFAM:SSF51695UniParc:UPI0004EE79AESEG:seg::
Description
BnaA05g05520D
Coordinates
chrLK031802:-:740882..744070
Molecular Weight (calculated)
68289.9 Da
IEP (calculated)
6.110
GRAVY (calculated)
-0.532
Length
600 amino acids
Sequence
(BLAST)
001: MGKEKKTESY DNGSYNYKMF KCFNRKFKIN EVQPTDDVRD AFCQFAVGCG GGGGDGDSSD GDASSGVMGA EQLYSGTTVA EAQRLIDDVI RRRHHVTRFT
101: RHGLNLDDFF NFLFYDDLNP PITPHVHQDM SAPLSHYFIY TGHNSYLTGN QLSSDCSEVP VIKALQRGVR VIELDLWPNS TGTDINVLHG RTLTTPVPLI
201: SCLKAIRDYA FSSSPYPVII TLEDHLTADL QAKVAEMATL IFGEMLYYPE SESLAEFPSP ASLLHRIMIS TKPPKEYLES SNPIVKQKDN NNASPSSEEE
301: TPRKEEIQTL ESILFYEDCC ENKNDSDQEE EEASEEQKPA YKRLITIHAG KPKGTVKEEM KVVVDKVRRL SLSEQELDRT CSSNSQDVVR FTQRNILRIY
401: PKGTRFNSSN YKPLSGWIHG AQMIAFNMQG YGKSLWLMHG MFRANGGCGY VKKPNFLMKK GFHDEVFDPR KKIPVKVYMG DGWRLDFSHT HFDSYSPPDF
501: YTKVYIVGVP ADNAKRKTRV IEDNWYPIWD EEFSFPLTVP ELALLRIEVS EYDMSDKDDF GGQTCLPVSE LRPGIRSVPL YDKKGEKMKS VKLLMRFIFE
Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)
001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE
Arabidopsis Description
PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.