CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70829	Canola	cytosol	77.36	53.78
CDY69947	Canola	cytosol	31.23	52.15
AT4G38530.1	Thale cress	cytosol	80.23	49.65
CDY01144	Canola	cytosol	53.87	40.0
CDY71544	Canola	cytosol	53.3	38.19
CDY02827	Canola	cytosol	56.45	37.38
CDY32694	Canola	cytosol	56.16	37.19
CDX80344	Canola	cytosol	59.03	36.85
CDY52120	Canola	cytosol, mitochondrion	58.74	36.67
CDX71156	Canola	cytosol, mitochondrion	60.46	34.53
CDY61028	Canola	cytosol, mitochondrion	60.46	34.53
PGSC0003DMT400078046	Potato	cytosol	43.55	34.39
GSMUA_Achr10P...	Banana	mitochondrion	50.43	34.11
CDY27998	Canola	cytosol	53.01	33.88
CDX75008	Canola	cytosol	16.62	33.53
CDY47356	Canola	mitochondrion	54.15	33.51
VIT_06s0004g06670.t01	Wine grape	cytosol	55.3	33.22
CDX80341	Canola	mitochondrion	54.15	32.03
CDY52122	Canola	cytosol, mitochondrion	53.87	31.92
CDY35983	Canola	mitochondrion	53.3	31.79
CDY32691	Canola	cytosol	53.87	31.65
CDY22153	Canola	mitochondrion	52.44	31.5
CDY33201	Canola	cytosol	11.46	31.25
KRH17039	Soybean	cytosol, mitochondrion	51.58	31.25
KRH72676	Soybean	cytosol, mitochondrion	32.66	30.32
CDY70294	Canola	mitochondrion	47.28	30.22
Solyc06g082000.2.1	Tomato	cytosol	48.71	30.04
HORVU1Hr1G014570.19	Barley	mitochondrion	49.86	29.85
CDX72188	Canola	mitochondrion	49.57	29.73
CDY27254	Canola	mitochondrion	49.57	29.73
TraesCS1A01G069300.1	Wheat	mitochondrion	48.71	29.06
CDY07057	Canola	cytosol	50.72	29.02
CDY07623	Canola	cytosol	49.28	28.91
TraesCS1D01G071800.3	Wheat	mitochondrion	49.0	28.89
CDY61706	Canola	cytosol	50.14	28.69
CDX74806	Canola	cytosol	49.28	28.67
CDY60344	Canola	cytosol	49.28	28.67
CDY20520	Canola	cytosol	49.57	28.45
OQU77319	Sorghum	mitochondrion	49.0	28.41
CDY71238	Canola	cytosol	32.95	28.4
CDY26989	Canola	cytosol, plastid	16.05	28.28
Os05t0127200-01	Rice	plasma membrane	48.14	28.09
HORVU1Hr1G014580.9	Barley	mitochondrion	48.42	27.7
CDY52121	Canola	cytosol	44.99	26.66
CDX80342	Canola	cytosol	44.7	26.49
CDY68902	Canola	cytosol	21.49	25.86
Zm00001d047447_P002	Maize	extracellular	48.14	25.26
CDY26990	Canola	cytosol	1.15	2.78

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	GO:A0A078JBM3
UniProt:A0A078JBM3	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDY65008	ProteinID:CDY65008	ProteinID:CDY65008.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556
EnsemblPlantsGene:GSBRNA2T00044008001	InterPro:IPR000008	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	PFAM:PF00168
PFAM:PF00387	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004
PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF101	MetaCyc:PWY-6351	MetaCyc:PWY-6367	MetaCyc:PWY-7039
SMART:SM00149	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI0004EE070B	SEG:seg

Description

BnaA06g40830DPhosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A078JBM3]

Coordinates

chrLK034623:+:20262..21592

Molecular Weight (calculated)

40268.9 Da

IEP (calculated)

8.268

GRAVY (calculated)

-0.624

Length

349 amino acids

Sequence
(BLAST)

001: MLTRTFRGML FRSDSESCKN FPSPEELKKK ILISTKPPKE YLESQVIQSS RRTPGTTNMS WRGENKIPEE DEEDEESEAV GYRDLIAIHA GNCKSGLEDC
101: LRDDPEKPRR ISVNEQWVEN VVRTRGSDVV RFTQRNLVRI YPKGTRVDSS NYDPHVGWTH GAQMVAFNMQ GHGKQLWTMQ GMFKANGGCG YVKKPRILLD
201: AQRLFDPCKR LPIKTTLKVK IFTGEGWDLD FPQTHFDQYS PPDFFVKIGI AGVPRDTVSY RTETAVDQWF PIWKQEFLFQ LSVPELALVW FRVQDYDNDT
301: HNDFAGQTCL PLPELKSGIR AVRLHDRAGK PYKNSRLLVS FYFDPPCTF

Best Arabidopsis Sequence Match ( AT4G38530.1 )
(BLAST)

001: MSESFKVCFC CSRSFKEKTR QPPVSIKRLF EAYSRNGKMS FDELLRFVSE VQGERHAGLD YVQDIFHSVK HHNVFHHHGL VHLNAFYRYL FSDTNSPLPM
101: SGQVHHDMKA PLSHYFVYTG HNSYLTGNQV NSRSSVEPIV QALRKGVKVI ELDLWPNPSG NAAEVRHGRT LTSHEDLQKC LTAIKDNAFH VSDYPVIITL
201: EDHLPPKLQA QVAKMLTKTY RGMLFRRVSE SFKHFPSPEE LKGKILISTK PPKEYLESKT VHTTRTPTVK ETSWNRVANK ILEEYKDMES EAVGYRDLIA
301: IHAANCKDPS KDCLSDDPEK PIRVSMDEQW LDTMVRTRGT DLVRFTQRNL VRIYPKGTRV DSSNYDPHVG WTHGAQMVAF NMQGHGKQLW IMQGMFRGNG
401: GCGYVKKPRI LLDEHTLFDP CKRFPIKTTL KVKIYTGEGW DLDFHHTHFD QYSPPDFFVK IGIAGVPRDT VSYRTETAVD QWFPIWGNDE FLFQLSVPEL
501: ALLWFKVQDY DNDTQNDFAG QTCLPLPELK SGVRAVRLHD RTGKAYKNTR LLVSFALDPP YTFR

Arabidopsis Description

PLC3Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A178UYI1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.