CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35983	Canola	mitochondrion	98.9	92.31
CDY22153	Canola	mitochondrion	93.22	87.61
AT3G08510.1	Thale cress	mitochondrion	93.04	87.44
CDY27254	Canola	mitochondrion	82.05	76.98
CDY70294	Canola	mitochondrion	76.92	76.92
CDX72188	Canola	mitochondrion	81.5	76.46
CDY01144	Canola	cytosol	65.02	75.53
CDY47356	Canola	mitochondrion	74.54	72.16
PGSC0003DMT400016945	Potato	endoplasmic reticulum	59.89	66.19
VIT_13s0067g00900.t01	Wine grape	mitochondrion	71.79	66.1
KRH14945	Soybean	mitochondrion	71.79	65.33
KRG97732	Soybean	mitochondrion	70.7	65.2
KRH73190	Soybean	endoplasmic reticulum	71.61	65.17
KRH31148	Soybean	mitochondrion	70.51	65.03
Solyc05g052760.2.1	Tomato	plastid	68.68	64.32
PGSC0003DMT400069760	Potato	mitochondrion	68.5	63.93
Solyc06g051620.2.1	Tomato	cytosol, mitochondrion	63.0	60.88
CDY69947	Canola	cytosol	23.26	60.77
CDY71544	Canola	cytosol	52.56	58.93
GSMUA_Achr10P...	Banana	mitochondrion	54.76	57.95
CDY52122	Canola	cytosol, mitochondrion	58.06	53.82
CDY07623	Canola	cytosol	58.42	53.61
CDY60344	Canola	cytosol	58.79	53.5
CDX80341	Canola	mitochondrion	57.33	53.05
CDY65008	Canola	cytosol	33.88	53.01
CDX74806	Canola	cytosol	57.88	52.67
CDY07057	Canola	cytosol	58.79	52.62
CDY32691	Canola	cytosol	57.14	52.53
CDY20520	Canola	cytosol	58.42	52.47
CDY61706	Canola	cytosol	58.61	52.46
HORVU1Hr1G014570.19	Barley	mitochondrion	54.4	50.94
TraesCS1A01G069300.1	Wheat	mitochondrion	54.03	50.43
TraesCS1D01G071800.3	Wheat	mitochondrion	54.21	50.0
Os05t0127200-01	Rice	plasma membrane	54.76	50.0
CDY52121	Canola	cytosol	53.3	49.41
OQU77319	Sorghum	mitochondrion	54.4	49.34
CDX80342	Canola	cytosol	53.11	49.24
CDY70829	Canola	cytosol	45.24	49.2
CDY52120	Canola	cytosol, mitochondrion	50.37	49.2
HORVU1Hr1G014580.9	Barley	mitochondrion	54.58	48.85
CDX80344	Canola	cytosol	50.0	48.84
CDY32694	Canola	cytosol	46.52	48.2
CDY02827	Canola	cytosol	46.52	48.2
CDY71238	Canola	cytosol	34.8	46.91
CDX75008	Canola	cytosol	14.65	46.24
CDX71156	Canola	cytosol, mitochondrion	51.1	45.66
CDY61028	Canola	cytosol, mitochondrion	50.92	45.5
Zm00001d047447_P002	Maize	extracellular	53.85	44.21
CDY33201	Canola	cytosol	10.26	43.75
CDY68902	Canola	cytosol	22.16	41.72
CDY26989	Canola	cytosol, plastid	11.9	32.83
CDY26990	Canola	cytosol	4.21	15.97

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	GO:A0A078GTM6
UniProt:A0A078GTM6	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDY27998	ProteinID:CDY27998	ProteinID:CDY27998.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556
EnsemblPlantsGene:GSBRNA2T00038923001	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892
PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom
InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336
PANTHER:PTHR10336:SF92	MetaCyc:PWY-6351	MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00148	SMART:SM00149
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI0004EE3B63	SEG:seg	:

Description

BnaC05g44000DPhosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A078GTM6]

Coordinates

chrLK032213:+:138420..141729

Molecular Weight (calculated)

61873.6 Da

IEP (calculated)

6.050

GRAVY (calculated)

-0.480

Length

546 amino acids

Sequence
(BLAST)

001: MTVDHLHRFL IDVQKQGKAT REDAQSIINA ASSLLHRNGL HLDAFFKYLF GDNNSPLAGH VVHQDMDAPI SHYFIFTGHN SYLTGNQLSS DCSEVPIIDA
101: LKKGVRVIEL DIWPNSNKND IDVLHGRTLT APVELIKCLK AIRAHAFDVS DYPVVVTLED HLTPELQSKV AEMVTEIFGE ILFTPPVGES LKEFPSPNSL
201: KRRIIISTKP PKEYKEGKDE ETVQKGKSLG DEEVWGREVP SFINRNKSGY KDDLVENDDD EDDDEDDDDG DKSKKNAPPQ YKHLIAIHAG KPKGGITECL
301: KVDPDKVRRL SLSEEQLEKA AEKYAIQIVR FTQRNLLRIY PKGTRVTSSN YNPLVAWSHG AQMVAFNMQG YGRSLWLMQG MFRANGGCGY IKKPDILLKG
401: GSDSDIFDPK ATLPVKTTLR VTIYMGEGWY FDFRHTHFDQ YSPPDFYTRV GIAGVPADTV MKKTKTLEDN WVPAWDEVFE FPLTVPELAL LRLEVHEYDM
501: SEKDDFGGQT CLPVWELKEG IRAFPLHNRK GEKYKSVKLL VRCEFV

Best Arabidopsis Sequence Match ( AT3G08510.1 )
(BLAST)

001: MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PGDTVMKKTK
501: TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V

Arabidopsis Description

PLC2Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A178VDK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.