CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020359.1-P	Field mustard	cytosol, mitochondrion	93.43	76.6
CDY32691	Canola	cytosol	93.22	76.43
CDY52122	Canola	cytosol, mitochondrion	86.45	71.48
CDX80341	Canola	mitochondrion	86.04	71.02
AT5G58700.3	Thale cress	cytosol	84.19	68.68
CDY01144	Canola	cytosol	57.49	59.57
HORVU0Hr1G012510.3	Barley	endoplasmic reticulum	50.92	58.63
CDY69947	Canola	cytosol	25.05	58.37
CDY65008	Canola	cytosol	38.19	53.3
GSMUA_Achr5P28270_001	Banana	plasma membrane	64.48	52.86
HORVU2Hr1G013730.2	Barley	cytosol	60.57	52.77
CDY27998	Canola	cytosol	58.93	52.56
GSMUA_Achr2P18980_001	Banana	mitochondrion	63.04	52.39
GSMUA_Achr5P08470_001	Banana	mitochondrion	63.04	51.86
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	62.42	51.26
CDY47356	Canola	mitochondrion	59.14	51.06
CDY70294	Canola	mitochondrion	56.67	50.55
GSMUA_AchrUn_...	Banana	mitochondrion	59.14	50.53
Zm00001d014903_P002	Maize	mitochondrion	60.78	50.51
Zm00001d014906_P003	Maize	plasma membrane	60.78	50.51
Os12t0562400-00	Rice	plasma membrane	60.99	50.34
CDY22153	Canola	mitochondrion	59.75	50.09
CDY35983	Canola	mitochondrion	60.16	50.09
EER99967	Sorghum	cytosol, mitochondrion	62.42	50.08
TraesCS2B01G098500.1	Wheat	cytosol, mitochondrion	62.01	49.84
Zm00001d007229_P001	Maize	cytosol, mitochondrion	62.01	49.84
Zm00001d028746_P001	Maize	plastid	59.96	49.58
CDY27254	Canola	mitochondrion	58.93	49.31
TraesCS2D01G082000.1	Wheat	cytosol, mitochondrion	61.4	49.26
TraesCS5D01G160300.1	Wheat	mitochondrion	59.55	49.24
Os07t0694000-01	Rice	plasma membrane	60.37	49.16
CDX72188	Canola	mitochondrion	58.73	49.14
TraesCS2A01G084000.2	Wheat	cytosol, mitochondrion	61.4	49.1
CDY07623	Canola	cytosol	59.75	48.91
CDY60344	Canola	cytosol	59.75	48.5
EES16479	Sorghum	cytosol, mitochondrion	60.37	48.2
OQU82674	Sorghum	cytosol, mitochondrion	59.96	47.71
CDX74806	Canola	cytosol	58.52	47.5
CDY07057	Canola	cytosol	59.14	47.21
CDY61706	Canola	cytosol	58.93	47.05
CDY20520	Canola	cytosol	58.73	47.04
TraesCS4B01G195200.2	Wheat	cytosol	60.99	46.92
TraesCS4A01G109000.2	Wheat	cytosol	60.78	46.76
TraesCS4D01G195800.1	Wheat	cytosol	60.57	46.6
HORVU4Hr1G056550.2	Barley	cytosol	60.16	46.0
Os03t0289300-00	Rice	plasma membrane	59.55	45.38
CDY70829	Canola	cytosol	46.61	45.22
CDY52121	Canola	cytosol	54.0	44.65
CDY32694	Canola	cytosol	48.25	44.59
CDY02827	Canola	cytosol	48.25	44.59
CDX80342	Canola	cytosol	53.8	44.48
CDX80344	Canola	cytosol	50.72	44.19
CDY52120	Canola	cytosol, mitochondrion	50.51	44.01
CDX75008	Canola	cytosol	14.78	41.62
OQU92774	Sorghum	cytosol	41.27	41.53
CDX71156	Canola	cytosol, mitochondrion	51.75	41.24
CDY61028	Canola	cytosol, mitochondrion	51.75	41.24
CDY71238	Canola	cytosol	33.88	40.74
CDY33201	Canola	cytosol	10.47	39.84
CDY68902	Canola	cytosol	21.97	36.9
OQU82766	Sorghum	cytosol	48.05	34.46
CDY26989	Canola	cytosol, plastid	13.76	33.84
CDY26990	Canola	cytosol	4.52	15.28

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	GO:A0A078JXW9
UniProt:A0A078JXW9	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDY71544	ProteinID:CDY71544	ProteinID:CDY71544.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556
EnsemblPlantsGene:GSBRNA2T00017068001	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892
PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom
InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336
PANTHER:PTHR10336:SF101	MetaCyc:PWY-6351	MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00148	SMART:SM00149
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI0004EE59BE	:	:

Description

BnaUnng04440DPhosphoinositide phospholipase C (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JXW9]

Coordinates

chrLK046293:+:2..2439

Molecular Weight (calculated)

55364.3 Da

IEP (calculated)

8.570

GRAVY (calculated)

-0.436

Length

487 amino acids

Sequence
(BLAST)

001: LTACFFFTFF QVHQNMDAPL SHYFIFTGHN SYLTGNQLSS NCSDLPIADA LRRGVRVVEL DLWPRGNDDV CVNHGRTLTK PVKLGKCLES IKANAFATSK
101: YPVIITLEDH LTPKLQSKVA KMITQTFGDM LYYHDSESCK EFPSPEELKG KILISTKPPK EYLEANDAKE KDNGEKGKDS DEDKVCNFLT TTKHHTLSIQ
201: MVMFDSEWFQ VATNISYNSQ DDEDRAPEYK RLIAIHAGKP KGGLRMALKV DPNKIRRLSL TVASYGADVI RFTQKNFLRI YPKGTRFNSS NYKPQVGWMS
301: GAQMIAFNMQ GYGRALWLMQ GMFRANGGCG YVKKPDFLMS VGPNGQVFDP NENSSPKKTL KVKVLMGDGW HLDFKKTHFD LYSPPDFYVR VGIAGAPADE
401: TMEKTEVKYD TWTPIWNQEF TFKLTVPELA LLRVEVHEYD ANEKDDFGGQ TCLPVSELRQ GIRAVPLFNR KGVKYSCTRL LMRFDFV

Best Arabidopsis Sequence Match ( AT5G58700.3 )
(BLAST)

001: MEGKKEMGSY KFCLIFTRKF RMTESGPVED VRDLFEKYTE GDAHMSPEQL QKLMTEEGGE GETSLEEAER IVDEVLRRKH HIAKFTRRNL TLDDFNYYLF
101: STDLNPPIAD QVHQNMDAPL SHYFIFTGHN SYLTGNQLSS NCSELPIADA LRRGVRVVEL DLWPRGTDDV CVKHGRTLTK EVKLGKCLES IKANAFAISK
201: YPVIITLEDH LTPKLQFKVA KMITQTFGDM LYYHDSQGCQ EFPSPEELKE KILISTKPPK EYLEANDTKE KDNGEKGKDS DEDVWGKEPE DLISTQSDLD
301: KVTSSVNDLN QDDEERGSCE SDTSCQLQAP EYKRLIAIHA GKPKGGLRMA LKVDPNKIRR LSLSEQLLEK AVASYGADVI RFTQKNFLRI YPKGTRFNSS
401: NYKPQIGWMS GAQMIAFNMQ GYGRALWLME GMFRANGGCG YVKKPDFLMD ASPNGQDFYP KDNSSPKKTL KVKVCMGDGW LLDFKKTHFD SYSPPDFFVR
501: VGIAGAPVDE VMEKTKIEYD TWTPIWNKEF TFPLAVPELA LLRVEVHEHD VNEKDDFGGQ TCLPVSEIRQ GIRAVPLFNR KGVKYSSTRL LMRFEFV

Arabidopsis Description

PLC4Phosphoinositide phospholipase C 4 [Source:UniProtKB/Swiss-Prot;Acc:Q944C1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.