Factsheet for GSMUA_Achr10P23000_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P18980_001	Banana	mitochondrion	78.75	79.69
GSMUA_Achr5P28270_001	Banana	plasma membrane	78.08	77.95
GSMUA_Achr5P08470_001	Banana	mitochondrion	68.47	68.58
EER99967	Sorghum	cytosol, mitochondrion	69.31	67.71
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	66.44	67.01
Zm00001d028746_P001	Maize	plastid	66.1	66.55
TraesCS2D01G082000.1	Wheat	cytosol, mitochondrion	67.96	66.39
Solyc06g007120.2.1	Tomato	nucleus	65.43	66.1
TraesCS2B01G098500.1	Wheat	cytosol, mitochondrion	67.28	65.84
Zm00001d007229_P001	Maize	cytosol, mitochondrion	67.12	65.68
GSMUA_AchrUn_...	Banana	mitochondrion	62.9	65.44
Os07t0694000-01	Rice	plasma membrane	65.94	65.38
TraesCS2A01G084000.2	Wheat	cytosol, mitochondrion	67.12	65.35
VIT_06s0004g06650.t01	Wine grape	cytosol	53.63	65.03
HORVU2Hr1G013730.2	Barley	cytosol	61.21	64.94
TraesCS4D01G195800.1	Wheat	cytosol	67.28	63.03
TraesCS4A01G109000.2	Wheat	cytosol	67.12	62.88
TraesCS4B01G195200.2	Wheat	cytosol	67.12	62.88
CDY71544	Canola	cytosol	51.26	62.42
Os03t0289300-00	Rice	plasma membrane	66.61	61.82
GSMUA_Achr10P...	Banana	mitochondrion	53.12	61.05
HORVU4Hr1G056550.2	Barley	cytosol	65.09	60.6
Bra020359.1-P	Field mustard	cytosol, mitochondrion	58.85	58.75
CDY32691	Canola	cytosol	58.85	58.75
Bra002625.1-P	Field mustard	mitochondrion	58.18	58.57
CDY52122	Canola	cytosol, mitochondrion	58.18	58.57
OQU92774	Sorghum	cytosol	47.72	58.47
CDX80341	Canola	mitochondrion	57.67	57.97
AT5G58700.3	Thale cress	cytosol	57.5	57.12
AT5G58690.1	Thale cress	cytosol	54.81	56.23
Bra002626.1-P	Field mustard	cytosol	53.79	55.0
CDY52121	Canola	cytosol	54.13	54.5
CDX80342	Canola	cytosol	54.13	54.5
Bra005237.1-P	Field mustard	cytosol	13.49	53.69
CDX75008	Canola	cytosol	14.5	49.71
CDY33201	Canola	cytosol	10.12	46.88
OQU82766	Sorghum	cytosol	52.78	46.1
AT3G47220.1	Thale cress	cytosol	37.44	41.81
AT3G47290.2	Thale cress	cytosol	35.75	37.0

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042
GO:GO:0016787	GO:GO:0035556	EnsemblPlantsGene:GSMUA_Achr10G23000_001	EnsemblPlants:GSMUA_Achr10P23000_001	EnsemblPlants:GSMUA_Achr10T23000_001	InterPro:IPR000008
InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	UniProt:M0RKM5	PFAM:PF00168
PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PI-PLC_plant	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom
InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336
PANTHER:PTHR10336:SF109	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562
SUPFAM:SSF51695	UniParc:UPI0002962B28	SEG:seg	:	:	:

Description

Phosphoinositide phospholipase C 6 [Source:GMGC_GENE;Acc:GSMUA_Achr10G23000_001]

Coordinates

chr10:+:27921511..27927550

Molecular Weight (calculated)

67429.1 Da

IEP (calculated)

5.633

GRAVY (calculated)

-0.472

Length

593 amino acids

Sequence
(BLAST)

001: MGSYKCCFCF TRKFRWSEAQ PPADVRAAFD AHSEGGTHMT ADQFRRFLAE AQGDAAVADV ERVMEQALEL GHRQLFHRKH FKPVFTVDDF HHYLFSEELN
101: PPLRSQVHQD MTAPLSHYYI YTGHNSYLTG NQLSSDCSDV PIIKALQNGV RVIELDMWPN ATKDNIDILH GRTLTSPVEL IKCLRSINEY AFSASPYPVI
201: ITLEDHLTPD LQAKVAEMVI ETFGDMLYYP DSESPKEFLS PEALKKRIII STKPPKEYLE AKNAKENDGD TKKVQESNEA WGMEVPDLQT ELECADKDED
301: VVDDGGGSDD DDDDNDDQKV RQSSPLEYKR IITIRAGKPK GHITEALKVD QEKVRRLSLS EQELAKATAS YDPFFLLFTQ RNLLRIYPKG TRFTSSNYNP
401: FVGWIHGAQM VAFNMQGYGR SLWLMHGFYK ANGGCGYVKK PDFLLSTGSN NEVFDPKAIL PVKKTLKVKV YMGDGWSMDF KKTHFDPYSP PDFYTRVGIA
501: GVPADATMKK TKAIEDNWIP VWDEEFVFPL TVPELAVLRI EVHEYDMSEK DDFAGQNCLP VSELKPGIRA VPLLDRKGMK FKSVKLLMRF EFA

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.