Factsheet for GSMUA_Achr2P18980_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	79.69	78.75
GSMUA_Achr5P28270_001	Banana	plasma membrane	78.67	77.61
GSMUA_Achr5P08470_001	Banana	mitochondrion	69.28	68.58
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	67.58	67.35
VIT_06s0004g06650.t01	Wine grape	cytosol	55.12	66.05
TraesCS2D01G082000.1	Wheat	cytosol, mitochondrion	68.26	65.9
Solyc06g007120.2.1	Tomato	nucleus	65.53	65.42
EER99967	Sorghum	cytosol, mitochondrion	67.75	65.4
GSMUA_AchrUn_...	Banana	mitochondrion	63.48	65.26
Zm00001d028746_P001	Maize	plastid	65.53	65.2
TraesCS2B01G098500.1	Wheat	cytosol, mitochondrion	67.41	65.18
TraesCS2A01G084000.2	Wheat	cytosol, mitochondrion	67.41	64.86
HORVU2Hr1G013730.2	Barley	cytosol	61.77	64.76
Os07t0694000-01	Rice	plasma membrane	65.53	64.21
Zm00001d007229_P001	Maize	cytosol, mitochondrion	65.87	63.7
CDY71544	Canola	cytosol	52.39	63.04
GSMUA_Achr10P...	Banana	mitochondrion	54.44	61.82
Os03t0289300-00	Rice	plasma membrane	67.06	61.5
TraesCS4B01G195200.2	Wheat	cytosol	66.38	61.45
TraesCS4A01G109000.2	Wheat	cytosol	66.38	61.45
TraesCS4D01G195800.1	Wheat	cytosol	66.38	61.45
Bra020359.1-P	Field mustard	cytosol, mitochondrion	61.77	60.94
CDY32691	Canola	cytosol	61.77	60.94
CDY52122	Canola	cytosol, mitochondrion	60.58	60.27
Bra002625.1-P	Field mustard	mitochondrion	60.58	60.27
CDX80341	Canola	mitochondrion	60.07	59.66
HORVU4Hr1G056550.2	Barley	cytosol	64.51	59.34
AT5G58700.3	Thale cress	cytosol	60.41	59.3
OQU92774	Sorghum	cytosol	47.44	57.44
AT5G58690.1	Thale cress	cytosol	55.46	56.23
Bra002626.1-P	Field mustard	cytosol	53.24	53.79
Bra005237.1-P	Field mustard	cytosol	13.65	53.69
CDX80342	Canola	cytosol	53.58	53.31
CDY52121	Canola	cytosol	53.41	53.14
CDX75008	Canola	cytosol	14.68	49.71
OQU82766	Sorghum	cytosol	53.75	46.39
CDY33201	Canola	cytosol	9.9	45.31
AT3G47220.1	Thale cress	cytosol	38.4	42.37
AT3G47290.2	Thale cress	cytosol	37.88	38.74

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787
GO:GO:0035556	EnsemblPlantsGene:GSMUA_Achr2G18980_001	EnsemblPlants:GSMUA_Achr2P18980_001	EnsemblPlants:GSMUA_Achr2T18980_001	InterPro:IPR000008	InterPro:IPR000909
InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	UniProt:M0S989	PFAM:PF00168	PFAM:PF00387
PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PI-PLC_plant	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y
PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF109
SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI000296DCE0
SEG:seg	:	:	:	:	:

Description

Phosphoinositide phospholipase C 4 [Source:GMGC_GENE;Acc:GSMUA_Achr2G18980_001]

Coordinates

chr2:-:19191409..19198919

Molecular Weight (calculated)

66077.2 Da

IEP (calculated)

4.997

GRAVY (calculated)

-0.496

Length

586 amino acids

Sequence
(BLAST)

001: MGSYTCCLCF TRRFRSSEAQ PPADVRAAFA TYAEGAAHMT ADQLRSFMSE AQGGDGADAD AERVMEQALL LRQRQPLLGK LAKPAFTVDD FYNYLFSEEL
101: NPPLGSQVHQ DMTAPLSHYY IYTGHNSYLT GNQLSSDCSD VPIIKALQDG VRVIELDMWP NATKDDIDIL HGRTLTSPVE LIKCLRSIKE HAFSASPYPV
201: IITLEDHLTP DLQAKVAEMV VETFGDMLYY PDTESLKEFP SPEALKERII ISTKPPKEYL EAKNVEENDD GTQEEKESDE EAWGKEVPDL QTELEYAKDV
301: DDGVDSDDDD QKKPQSSPLE YKSLITIQAG KPKSDMSEAL RVDPNKVKRL SLSEKELVKA APSHGSDLVR FTQKNLLRIY PKGTRVNSSN YNPFIGWIHG
401: AQMVAFNMQG YGRSLWLMHG FYKGNGGCGY VKKPDFLLEH GSDNDVFDPK ADLPVKKTLK VKVYMGDGWH ADFKQTHFDS YSPPDFYTRV GIAGVPADTT
501: MKKTKAVEDN WTPVWDEEFI FPLTVPELAL LRIEVHEHDK SGKDDFAGQI CLPISELRRG FRAVPLFDRK GMKFKSVRVL MRFEFV

Best Arabidopsis Sequence Match ( AT5G58700.3 )
(BLAST)

001: MEGKKEMGSY KFCLIFTRKF RMTESGPVED VRDLFEKYTE GDAHMSPEQL QKLMTEEGGE GETSLEEAER IVDEVLRRKH HIAKFTRRNL TLDDFNYYLF
101: STDLNPPIAD QVHQNMDAPL SHYFIFTGHN SYLTGNQLSS NCSELPIADA LRRGVRVVEL DLWPRGTDDV CVKHGRTLTK EVKLGKCLES IKANAFAISK
201: YPVIITLEDH LTPKLQFKVA KMITQTFGDM LYYHDSQGCQ EFPSPEELKE KILISTKPPK EYLEANDTKE KDNGEKGKDS DEDVWGKEPE DLISTQSDLD
301: KVTSSVNDLN QDDEERGSCE SDTSCQLQAP EYKRLIAIHA GKPKGGLRMA LKVDPNKIRR LSLSEQLLEK AVASYGADVI RFTQKNFLRI YPKGTRFNSS
401: NYKPQIGWMS GAQMIAFNMQ GYGRALWLME GMFRANGGCG YVKKPDFLMD ASPNGQDFYP KDNSSPKKTL KVKVCMGDGW LLDFKKTHFD SYSPPDFFVR
501: VGIAGAPVDE VMEKTKIEYD TWTPIWNKEF TFPLAVPELA LLRVEVHEHD VNEKDDFGGQ TCLPVSEIRQ GIRAVPLFNR KGVKYSSTRL LMRFEFV

Arabidopsis Description

PLC4Phosphoinositide phospholipase C 4 [Source:UniProtKB/Swiss-Prot;Acc:Q944C1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.