CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99967	Sorghum	cytosol, mitochondrion	56.85	63.59
Os07t0694000-01	Rice	plasma membrane	52.43	59.53
TraesCS2D01G082000.1	Wheat	cytosol, mitochondrion	52.28	58.48
TraesCS2B01G098500.1	Wheat	cytosol, mitochondrion	51.99	58.25
HORVU2Hr1G013730.2	Barley	cytosol	47.86	58.14
TraesCS2A01G084000.2	Wheat	cytosol, mitochondrion	51.99	57.96
GSMUA_Achr5P28270_001	Banana	plasma membrane	47.28	54.04
GSMUA_Achr2P18980_001	Banana	mitochondrion	46.39	53.75
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	46.1	52.78
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	44.48	51.36
Solyc06g007120.2.1	Tomato	nucleus	43.89	50.77
VIT_06s0004g06650.t01	Wine grape	cytosol	36.38	50.51
OQU92774	Sorghum	cytosol	34.76	48.76
CDY71544	Canola	cytosol	34.46	48.05
EES16479	Sorghum	cytosol, mitochondrion	41.68	46.39
CDY52122	Canola	cytosol, mitochondrion	40.21	46.35
Bra002625.1-P	Field mustard	mitochondrion	40.21	46.35
OQU82674	Sorghum	cytosol, mitochondrion	41.68	46.24
AT5G58690.1	Thale cress	cytosol	39.03	45.85
CDY32691	Canola	cytosol	39.91	45.62
Bra020359.1-P	Field mustard	cytosol, mitochondrion	39.91	45.62
CDX80341	Canola	mitochondrion	39.62	45.59
Bra002626.1-P	Field mustard	cytosol	38.44	45.0
AT5G58700.3	Thale cress	cytosol	39.32	44.72
CDY52121	Canola	cytosol	38.59	44.48
CDX80342	Canola	cytosol	38.44	44.31
OQU77319	Sorghum	mitochondrion	38.73	43.69
Bra005237.1-P	Field mustard	cytosol	9.13	41.61
CDX75008	Canola	cytosol	10.16	39.88
CDY33201	Canola	cytosol	7.07	37.5
AT3G47220.1	Thale cress	cytosol	28.13	35.97
AT3G47290.2	Thale cress	cytosol	29.01	34.38

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	UniProt:A0A1Z5RHC6
InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042
GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946
InterPro:IPR035892	EnsemblPlants:OQU82766	ProteinID:OQU82766	ProteinID:OQU82766.1	PFAM:PF00168	PFAM:PF00387
PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PI-PLC_plant	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y
PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF109
SMART:SM00148	SMART:SM00149	SMART:SM00239	EnsemblPlantsGene:SORBI_3005G018900	SUPFAM:SSF49562	SUPFAM:SSF51695
UniParc:UPI000B8B9FFB	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:1693652..1701278

Molecular Weight (calculated)

77900.6 Da

IEP (calculated)

7.599

GRAVY (calculated)

-0.601

Length

679 amino acids

Sequence
(BLAST)

001: MGTTTSYKCC CFHCWDGASP PPKAPPPPKD VGALFSLYAG GGPGGAPHHM DEDGLRRYLS VYQGEGTNVE HLLEQIRRQQ LFTLDDFHRI VVFSDELNPP
101: IRHQHRVHHD MTLPLSHYFI YSGHNPYYHA WRPDQRRRRS SSGRSDGSII RELKMGVRAI EVAMWPYSKG DDIQIHHGWN TPVLLTQCLK SIKKYAFLAS
201: PYPVIIRLED NLQSTNLQKK AAKVVLDVLG DILYWPYTDH IDIEIMHILQ WPFIDYFDLH VNTDSNKPLK NFPSPEELKG RVLLSTKTPT PILKKEKSKP
301: NEVDESMVDD TIEKGDAQLQ RGKGADDDDA AWGPEVPDFQ TEIQSAKKQH DSDVSTRQRQ RQRIDDNADD DQKEQKMQPQ EYPLYRHLIT IRAEKQKGSL
401: ADALQKQPDA VWPSLSAKKE AIEKAALNDA LQSDPDKVRR LSWSEKQIQK AAEDLGTTIV RFTQRNILWI NPSFSTKGYR RPTHLSSNYN PFLGWLHGAQ
501: MVALNMEEYG RALWLMHGFY RANGGCGYVR KPDFLMVTEP EVFDPRASYD VFTTLKVKVY MGDGWRMDFK HTQAPDFWTS IGITGVPKDT TTMKNSKATE
601: NTWIPVWGHE FSFPLTVPEI ALLRVEVHQY NVSEKDVFGG QTVLPVWELR PGIRAVALFD RQGNRFTNNV KLLMRFEFV

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.