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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 4
  • cytosol 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU82674 Sorghum cytosol, mitochondrion 96.72 96.41
Zm00001d014906_P003 Maize plasma membrane 87.05 90.61
Zm00001d014903_P002 Maize mitochondrion 86.72 90.27
HORVU0Hr1G012510.3 Barley endoplasmic reticulum 59.18 85.34
Os12t0562400-00 Rice plasma membrane 79.84 82.54
TraesCS5D01G160300.1 Wheat mitochondrion 78.36 81.15
GSMUA_Achr5P08470_001 Banana mitochondrion 65.25 67.23
VIT_06s0004g06650.t01 Wine grape cytosol 50.16 62.58
GSMUA_AchrUn_... Banana mitochondrion 58.2 62.28
Solyc06g007120.2.1 Tomato nucleus 59.67 62.01
VIT_06s0004g06660.t01 Wine grape cytosol, mitochondrion 58.2 60.37
CDY71544 Canola cytosol 48.2 60.37
EER99967 Sorghum cytosol, mitochondrion 59.02 59.31
CDY52122 Canola cytosol, mitochondrion 54.92 56.88
Bra002625.1-P Field mustard mitochondrion 54.92 56.88
CDX80341 Canola mitochondrion 54.75 56.61
CDY32691 Canola cytosol 54.43 55.89
Bra020359.1-P Field mustard cytosol, mitochondrion 54.26 55.72
AT5G58700.3 Thale cress cytosol 54.26 55.44
AT5G58690.1 Thale cress cytosol 50.98 53.81
Bra005237.1-P Field mustard cytosol 12.95 53.02
Bra002626.1-P Field mustard cytosol 49.18 51.72
OQU77319 Sorghum mitochondrion 50.98 51.66
CDY52121 Canola cytosol 49.51 51.27
CDY33201 Canola cytosol 10.66 50.78
CDX80342 Canola cytosol 49.02 50.76
OQU92774 Sorghum cytosol 40.16 50.62
CDX75008 Canola cytosol 13.93 49.13
AT3G47220.1 Thale cress cytosol 36.89 42.37
OQU82766 Sorghum cytosol 46.39 41.68
AT3G47290.2 Thale cress cytosol 36.07 38.39
Protein Annotations
KEGG:00562+3.1.4.11KEGG:04070+3.1.4.11Gene3D:2.60.40.150Gene3D:3.20.20.190MapMan:5.7.2.3.2InterPro:C2_dom
InterPro:C2_domain_sfUniProt:C5YQ01EnsemblPlants:EES16479ProteinID:EES16479ProteinID:EES16479.2GO:GO:0003674
GO:GO:0003824GO:GO:0004435GO:GO:0004871GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0006629GO:GO:0007154GO:GO:0007165GO:GO:0008081GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0016042GO:GO:0016787GO:GO:0035556InterPro:IPR000008
InterPro:IPR000909InterPro:IPR001711InterPro:IPR017946InterPro:IPR035892PFAM:PF00168PFAM:PF00387
PFAM:PF00388InterPro:PI-PLC_famInterPro:PLC-like_Pdiesterase_TIM-brlInterPro:PLipase_C_PInositol-sp_X_domInterPro:PLipase_C_Pinositol-sp_YPRINTS:PR00390
PFscan:PS50004PFscan:PS50007PFscan:PS50008PANTHER:PTHR10336PANTHER:PTHR10336:SF107MetaCyc:PWY-6351
MetaCyc:PWY-6367MetaCyc:PWY-7039SMART:SM00148SMART:SM00149SMART:SM00239EnsemblPlantsGene:SORBI_3008G002000
SUPFAM:SSF49562SUPFAM:SSF51695unigene:Sbi.3402UniParc:UPI00081AC05CSEG:seg:
Description
hypothetical protein
Coordinates
chr8:-:186878..191628
Molecular Weight (calculated)
68564.8 Da
IEP (calculated)
7.093
GRAVY (calculated)
-0.457
Length
610 amino acids
Sequence
(BLAST)
001: MGSYKYKYCM CFTRKFRSPD AQPPPDVRAA YLSFNSDVHA LRRFLSQAQA EHPADVDRIL ALLTAASGGH GIARLVTRSP APAMPTLEDF FAFLFSPELN
101: PPLPHQVHQD MSAPLSHYFI FTGHNSYLTG NQLNSDSSDI PIIKALQRGV RVIELDMWPN SSKTNVDILH GGTLTAPVEM IRCLKSIKEY AFCASPYPLV
201: ITLEDHLTPD LQAKVAKMLT ETFGDLLFVP SSDPMKEFPS PAALMKRIII STKPPQEYKE FLKVKDNQNG SGNIADLPDT GSLRRVDSNA DNQNGSGNLA
301: ADMGSLRRID SNADESDGKD ELDELDEEDS DEDDPKFQQD TACEYRKLIT IQAGKPKGHL RDALKVDPEK VRRLSLSETQ LAKATTSHGA EVIRFTQNNI
401: LRVYPKGTRV NSSNYDPMNA WTHGAQMVAF NMQGHDKALR LMQGFFRANG GCGYVKKPDF LLRTGPNGEV FDPKGSLPVK KTLKVKVYMG DGWRMDFSKT
501: HFDAFSPPDF YTRVGIAGVK ADTVMKKTRV IEDQWVPVWD EEFTFPLKVP ELALLRIEVQ EYDMSEKHDF GGQTCLPVWE LKQGIRAVPL HDRKGNRYKS
601: VRLLMRFDFF
Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)
001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE
Arabidopsis Description
PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.