Factsheet for TraesCS5D01G160300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G012510.3	Barley	endoplasmic reticulum	68.93	95.98
Zm00001d014906_P003	Maize	plasma membrane	82.0	82.42
Zm00001d014903_P002	Maize	mitochondrion	81.66	82.08
Os12t0562400-00	Rice	plasma membrane	80.81	80.68
EES16479	Sorghum	cytosol, mitochondrion	81.15	78.36
OQU82674	Sorghum	cytosol, mitochondrion	80.81	77.78
GSMUA_Achr5P08470_001	Banana	mitochondrion	67.57	67.23
GSMUA_AchrUn_...	Banana	mitochondrion	60.61	62.63
Solyc06g007120.2.1	Tomato	nucleus	62.31	62.52
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	61.29	61.39
VIT_06s0004g06650.t01	Wine grape	cytosol	50.59	60.94
CDY71544	Canola	cytosol	49.24	59.55
TraesCS2D01G082000.1	Wheat	cytosol, mitochondrion	60.78	58.98
CDY52122	Canola	cytosol, mitochondrion	57.56	57.56
Bra002625.1-P	Field mustard	mitochondrion	57.56	57.56
CDX80341	Canola	mitochondrion	57.05	56.95
Bra020359.1-P	Field mustard	cytosol, mitochondrion	56.54	56.06
CDY32691	Canola	cytosol	56.37	55.89
TraesCS4D01G195800.1	Wheat	cytosol	59.59	55.45
AT5G58700.3	Thale cress	cytosol	56.03	55.28
AT5G58690.1	Thale cress	cytosol	51.44	52.42
TraesCS1D01G071800.3	Wheat	mitochondrion	51.27	51.01
Bra005237.1-P	Field mustard	cytosol	12.9	51.01
Bra002626.1-P	Field mustard	cytosol	50.08	50.86
CDY52121	Canola	cytosol	50.42	50.42
CDX80342	Canola	cytosol	50.25	50.25
CDY33201	Canola	cytosol	10.7	49.22
CDX75008	Canola	cytosol	13.92	47.4
AT3G47220.1	Thale cress	cytosol	38.2	42.37
AT3G47290.2	Thale cress	cytosol	38.37	39.44

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892
PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom
InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336
PANTHER:PTHR10336:SF107	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF51695
EnsemblPlantsGene:TraesCS5D01G160300	EnsemblPlants:TraesCS5D01G160300.1	TIGR:cd00275	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:+:250061622..250066577

Molecular Weight (calculated)

65657.1 Da

IEP (calculated)

6.463

GRAVY (calculated)

-0.437

Length

589 amino acids

Sequence
(BLAST)

001: MGSYAYRYCM CFTRKFRSPD AHPPPDVRAA HAAAGAAHGD DGLRRFLADV QREDPAEADR VLAALSGGGA AGGIARFVGR SPAAALPTLD DFFGFLFSPD
101: LNPPISNKVH QDMSAPISHY YVFTGHNSYL TGNQLNSDSS DVPIIAALQN GVRVIELDMW PNSAKNCVDI LHGGTLTAPV EIMRCLKSIK EYAFCASTYP
201: LVITLEDHLT ADLQAKVAGM ITETFGDLLY VPSSDTLNEF PSPEALMRRI IISTKPPQEY REFLKAQGDQ KISGNADKLA EEGNLRRIDS NADDSDGKDE
301: PDDEDDEESE EEDPKFQPDT ACEYRKLITI HAGKPKGRMR DALKVDPDKV RRLSLSETQL GKATASHGAD IIRFTQRNIL RIYPKGTRIN SSNYDPMKAW
401: THGAQMVAFN MQGHDKSLRL MQGFFRANGG CGYVKKPDFL LKTGPNGEVF DPKASLPVKK TLKVKVYMGD GWRMDFSKTH FDAFSPPDFY ARVGIAGVRA
501: DCVMKKTRTI EDQWVPVWDE EFTFPLTVPE LALLRVEVQE YDMSEKHDFG GQTCLPVMEL KQGIRAVPLH DRKGNRYKSV RLLMRFELI

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.