Factsheet for Solyc06g007120.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	77.68	77.55
GSMUA_Achr5P28270_001	Banana	plasma membrane	68.65	67.85
GSMUA_Achr5P08470_001	Banana	mitochondrion	67.46	66.89
HORVU0Hr1G012510.3	Barley	endoplasmic reticulum	47.7	66.19
Solyc05g052760.2.1	Tomato	plastid	65.59	66.04
GSMUA_Achr2P18980_001	Banana	mitochondrion	65.42	65.53
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	66.1	65.43
GSMUA_AchrUn_...	Banana	mitochondrion	61.67	63.51
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	63.37	62.73
Solyc06g051620.2.1	Tomato	cytosol, mitochondrion	60.14	62.48
TraesCS5D01G160300.1	Wheat	mitochondrion	62.52	62.31
HORVU2Hr1G013730.2	Barley	cytosol	59.28	62.25
Zm00001d014903_P002	Maize	mitochondrion	61.84	61.95
EER99967	Sorghum	cytosol, mitochondrion	64.05	61.94
Zm00001d014906_P003	Maize	plasma membrane	61.67	61.77
Os12t0562400-00	Rice	plasma membrane	61.84	61.53
Solyc10g076710.1.1	Tomato	cytosol	62.35	60.9
TraesCS2B01G098500.1	Wheat	cytosol, mitochondrion	62.86	60.89
Zm00001d007229_P001	Maize	cytosol, mitochondrion	62.69	60.73
Zm00001d028746_P001	Maize	plastid	60.65	60.44
TraesCS2D01G082000.1	Wheat	cytosol, mitochondrion	62.35	60.3
TraesCS2A01G084000.2	Wheat	cytosol, mitochondrion	62.52	60.26
Os07t0694000-01	Rice	plasma membrane	60.99	59.87
EES16479	Sorghum	cytosol, mitochondrion	62.01	59.67
OQU82674	Sorghum	cytosol, mitochondrion	61.33	58.82
TraesCS4B01G195200.2	Wheat	cytosol	61.84	57.35
TraesCS4A01G109000.2	Wheat	cytosol	61.67	57.19
TraesCS4D01G195800.1	Wheat	cytosol	61.67	57.19
Os03t0289300-00	Rice	plasma membrane	61.84	56.81
HORVU4Hr1G056550.2	Barley	cytosol	60.14	55.42
Solyc06g082000.2.1	Tomato	cytosol	52.98	54.95
OQU92774	Sorghum	cytosol	43.61	52.89
OQU82766	Sorghum	cytosol	50.77	43.89
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	62.18	41.29

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2
UniProt:B6C9K2	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	EMBL:EU099597	GO:GO:0003674
GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008
InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	PFAM:PF00168	PFAM:PF00387
PFAM:PF00388	PFAM:PF09279	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom
InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336
PANTHER:PTHR10336:SF101	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562
SUPFAM:SSF51695	EnsemblPlantsGene:Solyc06g007120.2	EnsemblPlants:Solyc06g007120.2.1	UniParc:UPI00018179F9	SEG:seg	:

Description

Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:B6C9K2]

Coordinates

chr6:+:1174772..1180699

Molecular Weight (calculated)

66303.1 Da

IEP (calculated)

6.795

GRAVY (calculated)

-0.479

Length

587 amino acids

Sequence
(BLAST)

001: MGNYRVCVCF SRKFKVTEAE PPTDVKEAFK KYGDGGNQMS AEQLLKFLIE VQGETQLTVA DADAVVRQIL QKRHPITKLA RQALALDDFH HYLFSADLNP
101: PINSKVDHDM NAPLSHYFIF TGHNSYLTGN QLTSDCSDVP IIKALKKGVR VIELDIWPNS DKDDVHVLHG RTVTTPVELI RCLKSIKEHA FSASPYPVVI
201: TLEDHLTPDL QAKVAQMLTE TFGEMLFVPE SDSLKECPSP EELKHRIIIS TKPPKEYLEA SASVCKDRRN SSQRSKDSED DVWGSEPSSL TADQEENEKS
301: DSDKSYEDDD DATHRGHVAS AYKRLIAIHA GKPKGGLKEA LKIDPDKVRR LSLSEQALEK AAESHGTDIV RFTQRNILRV YPKGTRFNSS NYKPLIGWMH
401: GAQMVAFNMQ GYGRALWLMH GMFRANGGCG YVKKPDFLLS IGPNNEVFDP KAKLPVKKTL KVKVYMGDGW HLDFKQTHFD LYSPPDFYTR VGIAGVPADE
501: VMKKTKTKED KWTPVWDEEF TFPLTVPELA LLRIEVHEYD MSEKDDFAGQ TCIPVSELKP GIHAVPLCNR KGEIYNSARL LMRFEFI

Best Arabidopsis Sequence Match ( AT5G58700.3 )
(BLAST)

001: MEGKKEMGSY KFCLIFTRKF RMTESGPVED VRDLFEKYTE GDAHMSPEQL QKLMTEEGGE GETSLEEAER IVDEVLRRKH HIAKFTRRNL TLDDFNYYLF
101: STDLNPPIAD QVHQNMDAPL SHYFIFTGHN SYLTGNQLSS NCSELPIADA LRRGVRVVEL DLWPRGTDDV CVKHGRTLTK EVKLGKCLES IKANAFAISK
201: YPVIITLEDH LTPKLQFKVA KMITQTFGDM LYYHDSQGCQ EFPSPEELKE KILISTKPPK EYLEANDTKE KDNGEKGKDS DEDVWGKEPE DLISTQSDLD
301: KVTSSVNDLN QDDEERGSCE SDTSCQLQAP EYKRLIAIHA GKPKGGLRMA LKVDPNKIRR LSLSEQLLEK AVASYGADVI RFTQKNFLRI YPKGTRFNSS
401: NYKPQIGWMS GAQMIAFNMQ GYGRALWLME GMFRANGGCG YVKKPDFLMD ASPNGQDFYP KDNSSPKKTL KVKVCMGDGW LLDFKKTHFD SYSPPDFFVR
501: VGIAGAPVDE VMEKTKIEYD TWTPIWNKEF TFPLAVPELA LLRVEVHEHD VNEKDDFGGQ TCLPVSEIRQ GIRAVPLFNR KGVKYSSTRL LMRFEFV

Arabidopsis Description

PLC4Phosphoinositide phospholipase C 4 [Source:UniProtKB/Swiss-Prot;Acc:Q944C1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.