Factsheet for Os12t0562400-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G012510.3	Barley	endoplasmic reticulum	60.85	84.87
Zm00001d014906_P003	Maize	plasma membrane	82.03	82.59
Zm00001d014903_P002	Maize	mitochondrion	81.69	82.25
TraesCS5D01G160300.1	Wheat	mitochondrion	80.68	80.81
EES16479	Sorghum	cytosol, mitochondrion	82.54	79.84
OQU82674	Sorghum	cytosol, mitochondrion	81.53	78.59
GSMUA_Achr5P08470_001	Banana	mitochondrion	66.1	65.88
GSMUA_AchrUn_...	Banana	mitochondrion	61.69	63.86
Solyc06g007120.2.1	Tomato	nucleus	61.53	61.84
VIT_06s0004g06650.t01	Wine grape	cytosol	50.85	61.35
CDY71544	Canola	cytosol	50.34	60.99
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	60.51	60.71
Os07t0694000-01	Rice	plasma membrane	58.98	58.19
CDY52122	Canola	cytosol, mitochondrion	56.95	57.05
Bra002625.1-P	Field mustard	mitochondrion	56.95	57.05
CDY32691	Canola	cytosol	57.29	56.9
Bra020359.1-P	Field mustard	cytosol, mitochondrion	57.12	56.73
CDX80341	Canola	mitochondrion	56.61	56.61
AT5G58700.3	Thale cress	cytosol	55.93	55.28
Os03t0289300-00	Rice	plasma membrane	58.98	54.46
AT5G58690.1	Thale cress	cytosol	52.54	53.63
Bra002626.1-P	Field mustard	cytosol	50.85	51.72
CDY52121	Canola	cytosol	51.36	51.44
Bra005237.1-P	Field mustard	cytosol	12.88	51.01
CDX80342	Canola	cytosol	50.85	50.93
Os05t0127200-01	Rice	plasma membrane	50.68	50.0
CDY33201	Canola	cytosol	10.51	48.44
CDX75008	Canola	cytosol	13.9	47.4
AT3G47220.1	Thale cress	cytosol	38.31	42.56
AT3G47290.2	Thale cress	cytosol	38.81	39.97

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	EntrezGene:4352524	MapMan:5.7.2.3.2	ProteinID:ABA98951.2
ProteinID:BAT17654.1	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:EEE53433.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629
GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909
InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	EnsemblPlantsGene:Os12g0562400	EnsemblPlants:Os12t0562400-00	PFAM:PF00168
PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y
PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF107
UniProt:Q2QNK1	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF51695
UniParc:UPI0000680E02	RefSeq:XP_015618103.1	SEG:seg	:	:	:

Description

PHOSPHOLIPASE C3Similar to Phospholipase C (Fragment). (Os12t0562400-00)

Coordinates

chr12:+:23048705..23053244

Molecular Weight (calculated)

65517.2 Da

IEP (calculated)

6.879

GRAVY (calculated)

-0.420

Length

590 amino acids

Sequence
(BLAST)

001: MGSYAYKYCM CFTRKFRSPA ADPPPDVRAA FLAAGGGDGG LRRFLAQAQG ETPAEVDRIL ALLSGGGGGG GGGGIAARLV GPRPGPAPSL DDFFGFLFNA
101: DLNPPIATQV HQDMSAPFSH YYIYTGHNSY LTGNQLNSDS SDIPIIKALQ RGVRVIELDM WPNSAKNNID ILHGGTLTAP VQIIKCLKSI KEYAFCASPY
201: PLVITLEDHL TPDLQAKVAE MLVKTFGNLL YIPSSDPINE FPSPESLMKK IIISTKPPEE YKKFLKSKDN QNINGGLANL AEEGSLRRID SNAEESDGKD
301: ELDDQDEDSS DEDDPKFQQE TACEYRELIT IHAGKPKGHL KDALKVDPDK VRRLSLSETQ LAKATASHGA DVIRFTQKNI LRVYPKGTRI NSSNYDPMNA
401: WTHGAQMVAF NMQGHDKALR LMQGFFRANG GCGYVKKPDF LLRTGPNGEV FDPNASMPVK KTLKVKVYMG DGWRMDFSKT HFDTFSPPDF YTRVGIAGVR
501: ADCVMKKTRT IEDQWVPMWD EEFTFPLTVP ELAVLRIEVH EYDMSEKHDF GGQTCLPVSE LKQGIRAVPL HDRRGTRYKS VRLLMRFDFL

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.