Factsheet for VIT_06s0004g06650.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	77.3	64.29
HORVU0Hr1G012510.3	Barley	endoplasmic reticulum	51.53	59.57
VIT_13s0067g00900.t01	Wine grape	mitochondrion	68.51	56.49
GSMUA_Achr2P18980_001	Banana	mitochondrion	66.05	55.12
GSMUA_Achr5P08470_001	Banana	mitochondrion	66.67	55.07
GSMUA_Achr5P28270_001	Banana	plasma membrane	66.46	54.71
HORVU2Hr1G013730.2	Barley	cytosol	61.55	53.85
VIT_13s0067g00890.t01	Wine grape	cytosol	65.03	53.72
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	65.03	53.63
VIT_08s0105g00300.t01	Wine grape	cytosol	60.33	53.54
GSMUA_AchrUn_...	Banana	mitochondrion	62.37	53.51
Zm00001d014903_P002	Maize	mitochondrion	61.96	51.71
Zm00001d014906_P003	Maize	plasma membrane	61.96	51.71
Os12t0562400-00	Rice	plasma membrane	61.35	50.85
TraesCS5D01G160300.1	Wheat	mitochondrion	60.94	50.59
EER99967	Sorghum	cytosol, mitochondrion	62.78	50.58
VIT_08s0007g02280.t01	Wine grape	cytosol, mitochondrion	64.21	50.56
TraesCS2B01G098500.1	Wheat	cytosol, mitochondrion	62.37	50.33
TraesCS2D01G082000.1	Wheat	cytosol, mitochondrion	62.37	50.25
AT5G58690.1	Thale cress	cytosol	59.3	50.17
EES16479	Sorghum	cytosol, mitochondrion	62.58	50.16
Zm00001d028746_P001	Maize	plastid	60.33	50.08
OQU82674	Sorghum	cytosol, mitochondrion	62.37	49.84
TraesCS2A01G084000.2	Wheat	cytosol, mitochondrion	61.96	49.75
Zm00001d007229_P001	Maize	cytosol, mitochondrion	61.15	49.34
Bra002626.1-P	Field mustard	cytosol	58.28	49.14
Os07t0694000-01	Rice	plasma membrane	59.92	49.0
VIT_06s0004g06670.t01	Wine grape	cytosol	58.08	48.88
CDY52121	Canola	cytosol	58.28	48.39
CDX80342	Canola	cytosol	58.08	48.22
Os03t0289300-00	Rice	plasma membrane	62.17	47.57
TraesCS4D01G195800.1	Wheat	cytosol	60.94	47.08
HORVU4Hr1G056550.2	Barley	cytosol	61.15	46.94
TraesCS4A01G109000.2	Wheat	cytosol	60.74	46.92
TraesCS4B01G195200.2	Wheat	cytosol	60.74	46.92
Bra005237.1-P	Field mustard	cytosol	13.5	44.3
OQU92774	Sorghum	cytosol	42.13	42.56
CDX75008	Canola	cytosol	14.52	41.04
CDY33201	Canola	cytosol	10.43	39.84
OQU82766	Sorghum	cytosol	50.51	36.38

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	EntrezGene:100267383	wikigene:100267383	Gene3D:2.60.40.150	Gene3D:3.20.20.190
MapMan:5.7.2.3.2	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:CCB43476	ProteinID:CCB43476.1	UniProt:F6GUR3
EMBL:FN594951	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787
GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892
EntrezGene:LOC100267383	wikigene:LOC100267383	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam
InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007
PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF101	SMART:SM00148	SMART:SM00149	SMART:SM00239
SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI0002108946	ArrayExpress:VIT_06s0004g06650	EnsemblPlantsGene:VIT_06s0004g06650	EnsemblPlants:VIT_06s0004g06650.t01
RefSeq:XP_002278839	RefSeq:XP_002278839.2	SEG:seg	:	:	:

Description

Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:F6GUR3]

Coordinates

chr6:+:7366079..7369101

Molecular Weight (calculated)

55597.6 Da

IEP (calculated)

9.199

GRAVY (calculated)

-0.503

Length

489 amino acids

Sequence
(BLAST)

001: MPFQVHQDMS APLSHYFIYT GHNSYLTGNQ LNSNCSDVPI VKALKRGVRM VELDLWPGST KENVHVLHGR TLTTPVELIK CLKSIKEHAF SASPYPVIIT
101: LEDHLTPDLQ AKVAQMISQT FGDMLFYPKS ESLPEFPSPE ELKYRVIIST KPPKEYLEAK SSEDKVNNSQ KGKDSDEDVS MKVPPDLTVD HESNDKSDSG
201: RSEGSSENDE SNDECDRPLE APAYKHLIAI HAAKPSGGLK ASLKVEPNKV SRLSLNEQAF GKAIAYHRRD VVRFTQKNLL RVYPKATRFN SSNYKPLIGW
301: MHGVQLLAFN MQGHGRSLWL MHGMFRANGG CGYVKKPDFL LNVSPHNQVF DPKAKLPVKK TLKVRVYLGD GWNFDFKKTH FDFYSPPDFY TRVGIAGAAA
401: DKTMKETKKK QNNWKPVWNE EFTFPLTVPE LALLRIEVYE YNMPEKDMFA GQTCLPVWEL RQGIRAVPLF NRKGEMYSSV RLLMSFQFV

Best Arabidopsis Sequence Match ( AT5G58700.3 )
(BLAST)

001: MEGKKEMGSY KFCLIFTRKF RMTESGPVED VRDLFEKYTE GDAHMSPEQL QKLMTEEGGE GETSLEEAER IVDEVLRRKH HIAKFTRRNL TLDDFNYYLF
101: STDLNPPIAD QVHQNMDAPL SHYFIFTGHN SYLTGNQLSS NCSELPIADA LRRGVRVVEL DLWPRGTDDV CVKHGRTLTK EVKLGKCLES IKANAFAISK
201: YPVIITLEDH LTPKLQFKVA KMITQTFGDM LYYHDSQGCQ EFPSPEELKE KILISTKPPK EYLEANDTKE KDNGEKGKDS DEDVWGKEPE DLISTQSDLD
301: KVTSSVNDLN QDDEERGSCE SDTSCQLQAP EYKRLIAIHA GKPKGGLRMA LKVDPNKIRR LSLSEQLLEK AVASYGADVI RFTQKNFLRI YPKGTRFNSS
401: NYKPQIGWMS GAQMIAFNMQ GYGRALWLME GMFRANGGCG YVKKPDFLMD ASPNGQDFYP KDNSSPKKTL KVKVCMGDGW LLDFKKTHFD SYSPPDFFVR
501: VGIAGAPVDE VMEKTKIEYD TWTPIWNKEF TFPLAVPELA LLRVEVHEHD VNEKDDFGGQ TCLPVSEIRQ GIRAVPLFNR KGVKYSSTRL LMRFEFV

Arabidopsis Description

PLC4Phosphoinositide phospholipase C 4 [Source:UniProtKB/Swiss-Prot;Acc:Q944C1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.