Factsheet for TraesCS4A01G109000.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G195200.2	Wheat	cytosol	97.47	97.47
TraesCS4D01G195800.1	Wheat	cytosol	97.31	97.31
HORVU4Hr1G056550.2	Barley	cytosol	92.58	91.99
Zm00001d028746_P001	Maize	plastid	76.94	82.68
Os03t0289300-00	Rice	plasma membrane	80.88	80.13
OQU92774	Sorghum	cytosol	59.72	78.1
TraesCS2A01G084000.2	Wheat	cytosol, mitochondrion	66.67	69.29
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	62.88	67.12
GSMUA_Achr5P28270_001	Banana	plasma membrane	62.88	67.0
GSMUA_Achr2P18980_001	Banana	mitochondrion	61.45	66.38
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	58.61	63.1
Solyc06g007120.2.1	Tomato	nucleus	57.19	61.67
CDY71544	Canola	cytosol	46.76	60.78
VIT_06s0004g06650.t01	Wine grape	cytosol	46.92	60.74
CDY52122	Canola	cytosol, mitochondrion	53.71	57.73
Bra002625.1-P	Field mustard	mitochondrion	53.71	57.73
CDX80341	Canola	mitochondrion	53.4	57.29
AT5G58700.3	Thale cress	cytosol	54.03	57.29
CDY32691	Canola	cytosol	53.71	57.24
Bra020359.1-P	Field mustard	cytosol, mitochondrion	53.55	57.07
TraesCS1A01G069300.1	Wheat	mitochondrion	50.08	54.19
AT5G58690.1	Thale cress	cytosol	48.18	52.77
Bra002626.1-P	Field mustard	cytosol	46.45	50.69
Bra005237.1-P	Field mustard	cytosol	11.85	50.34
CDY52121	Canola	cytosol	46.76	50.25
CDX80342	Canola	cytosol	46.76	50.25
CDX75008	Canola	cytosol	12.8	46.82
CDY33201	Canola	cytosol	9.32	46.09
AT3G47220.1	Thale cress	cytosol	34.91	41.62
AT3G47290.2	Thale cress	cytosol	35.07	38.74

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0006629
GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946
InterPro:IPR035892	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PI-PLC_plant
InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007
PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF109	SMART:SM00148	SMART:SM00149	SMART:SM00239
SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695	EnsemblPlantsGene:TraesCS4A01G109000	EnsemblPlants:TraesCS4A01G109000.2	TIGR:cd00275
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:129086595..129090000

Molecular Weight (calculated)

71116.7 Da

IEP (calculated)

5.563

GRAVY (calculated)

-0.446

Length

633 amino acids

Sequence
(BLAST)

001: MEREISPEAP PTRTRLLPRG PNEERKPGDP GGPGAEAEAA EMGTYKCCIF FTRRFAPPDA TTPEDVRTLF SRFSGGTPYM GVDELRRYLA ATGELDGDGG
101: MDAAERIVDR FLQGRSRTPR FGRPALTVDD FHNFLFSEDL NPPIRQSKVH HDMNAPLSHY FIYTGHNSYL TGNQLSSDCS DAPIIKALQI GVRVIELDMW
201: PNSSKDDIDI LHGRTLTAPV SLLKCLTSIK EYAFVASPYP VIITLEDHLT SDLQAKVAKM VLEVFGDILY YPESKHLQEF PSPEALKGRV ILSTKPPKEY
301: LEAKGGTMKD RDIEPKFSKG ENEESAWGIE VPDIQDELQD ANKDDMSYPE RGVDEDDEQI VRKNAPLEYK HLITIKAGKP KGSLVDALNS DPEKVRRLSL
401: SEQELAKVAA CHGPKIVSFT QRNLLRIYPK GTRFNSSNYN PFLGWVHGAQ MVAFNMQGYG RALWLMNGFY KANGGCGYVK KPDFLMQTCP DGKVFDPTAD
501: LPVKKTLKVK VYMGDGWQQD FKQTHFDSYS PPDFYAKVGI AGVPSDSVMR KTRVVEDSWV PMWEDGFTFP LTVPEIALLR VEVHEYDVNE DDFGGQTVLP
601: VSELWPGIRT VPLFDHKGMK FKSVKLLMSF EFV

Best Arabidopsis Sequence Match ( AT5G58700.3 )
(BLAST)

001: MEGKKEMGSY KFCLIFTRKF RMTESGPVED VRDLFEKYTE GDAHMSPEQL QKLMTEEGGE GETSLEEAER IVDEVLRRKH HIAKFTRRNL TLDDFNYYLF
101: STDLNPPIAD QVHQNMDAPL SHYFIFTGHN SYLTGNQLSS NCSELPIADA LRRGVRVVEL DLWPRGTDDV CVKHGRTLTK EVKLGKCLES IKANAFAISK
201: YPVIITLEDH LTPKLQFKVA KMITQTFGDM LYYHDSQGCQ EFPSPEELKE KILISTKPPK EYLEANDTKE KDNGEKGKDS DEDVWGKEPE DLISTQSDLD
301: KVTSSVNDLN QDDEERGSCE SDTSCQLQAP EYKRLIAIHA GKPKGGLRMA LKVDPNKIRR LSLSEQLLEK AVASYGADVI RFTQKNFLRI YPKGTRFNSS
401: NYKPQIGWMS GAQMIAFNMQ GYGRALWLME GMFRANGGCG YVKKPDFLMD ASPNGQDFYP KDNSSPKKTL KVKVCMGDGW LLDFKKTHFD SYSPPDFFVR
501: VGIAGAPVDE VMEKTKIEYD TWTPIWNKEF TFPLAVPELA LLRVEVHEHD VNEKDDFGGQ TCLPVSEIRQ GIRAVPLFNR KGVKYSSTRL LMRFEFV

Arabidopsis Description

PLC4Phosphoinositide phospholipase C 4 [Source:UniProtKB/Swiss-Prot;Acc:Q944C1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.