Factsheet for Zm00001d028746_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 20089766
extracellular: 20408568
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92774	Sorghum	cytosol	70.8	86.16
TraesCS4B01G195200.2	Wheat	cytosol	83.02	77.25
TraesCS4D01G195800.1	Wheat	cytosol	82.68	76.94
TraesCS4A01G109000.2	Wheat	cytosol	82.68	76.94
Os03t0289300-00	Rice	plasma membrane	82.51	76.06
HORVU4Hr1G056550.2	Barley	cytosol	79.29	73.31
Zm00001d007229_P001	Maize	cytosol, mitochondrion	68.93	67.0
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	66.55	66.1
GSMUA_Achr2P18980_001	Banana	mitochondrion	65.2	65.53
GSMUA_Achr5P28270_001	Banana	plasma membrane	66.04	65.49
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	62.65	62.76
Solyc06g007120.2.1	Tomato	nucleus	60.44	60.65
VIT_06s0004g06650.t01	Wine grape	cytosol	50.08	60.33
CDY71544	Canola	cytosol	49.58	59.96
Zm00001d014903_P002	Maize	mitochondrion	57.39	57.68
Zm00001d014906_P003	Maize	plasma membrane	57.05	57.34
AT5G58700.3	Thale cress	cytosol	57.22	56.45
CDY32691	Canola	cytosol	56.88	56.4
CDY52122	Canola	cytosol, mitochondrion	56.37	56.37
Bra002625.1-P	Field mustard	mitochondrion	56.37	56.37
Bra020359.1-P	Field mustard	cytosol, mitochondrion	56.71	56.23
CDX80341	Canola	mitochondrion	56.03	55.93
AT5G58690.1	Thale cress	cytosol	51.27	52.25
Bra002626.1-P	Field mustard	cytosol	50.76	51.55
CDY52121	Canola	cytosol	51.1	51.1
CDX80342	Canola	cytosol	51.1	51.1
Bra005237.1-P	Field mustard	cytosol	12.9	51.01
CDX75008	Canola	cytosol	13.75	46.82
CDY33201	Canola	cytosol	10.02	46.09
Zm00001d047447_P002	Maize	extracellular	51.27	45.41
AT3G47220.1	Thale cress	cytosol	35.65	39.55
AT3G47290.2	Thale cress	cytosol	35.65	36.65

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	UniProt:A0A1D6JZ59
InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435
GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711
InterPro:IPR017946	InterPro:IPR035892	ProteinID:ONL96905.1	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388
InterPro:PI-PLC_fam	InterPro:PI-PLC_plant	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390
PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF109	SMART:SM00148
SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI0002218354
EnsemblPlantsGene:Zm00001d028746	EnsemblPlants:Zm00001d028746_P001	EnsemblPlants:Zm00001d028746_T001	:	:	:

Description

Phosphoinositide phospholipase C 4

Coordinates

chr1:-:45171565..45179033

Molecular Weight (calculated)

66521.7 Da

IEP (calculated)

6.376

GRAVY (calculated)

-0.345

Length

589 amino acids

Sequence
(BLAST)

001: MGTYKCCIFF TRRFALGDTS TPEDVRALFS LYAGGSPYML ADDLRRYLAA WGGADGEVPE QIIDRILQDR SRTPRFGRPA LTVDDFLHFL FSEDLNPPLR
101: YSKVHQDMNA PLSHYFIYTG HNSYLTGNQL SSDCSDVPII KALQLGVRVI ELDIWPNSCK DDIDVLHGRT LTAPVSLIKC LRSIKEYAFV ASPYPVIITL
201: EDHLTPDLQE RVAKMVLEVF GDILYYPESK HLQEFPSPEA LKGRVMLSTK PPKEYLEAKG DTMKEKEIEA RIKRGEREAA AWGVEVPDIQ DEMQVADKDE
301: DELLYRERGA DGDDGKETKH VAAEYKHLIT IKAGKPKGPL VDAIKNDPDK VRRLSLSEQE LAKVAAHHGP NIVSFTHRNM LRIYPKGTRF NSSNYNPFLG
401: WVHGAQMVAF NMQGYGRALW LMHGFYKANG GCGYVKKPDF LMQTCPDGKV FDSKADLPVK ATLKVKVYMG EGWQKDFKQT HFDSYSPPDF YVKVGIAGVP
501: LDSVMRKTKA VEDSWVPVWE EEFAFPLTVP EIAVLRVEVH EQDVNEDDFG GQTALPVAEL RPGIRAVPLF DHKGLKFKSV KVLMSFEFA

Best Arabidopsis Sequence Match ( AT5G58700.3 )
(BLAST)

001: MEGKKEMGSY KFCLIFTRKF RMTESGPVED VRDLFEKYTE GDAHMSPEQL QKLMTEEGGE GETSLEEAER IVDEVLRRKH HIAKFTRRNL TLDDFNYYLF
101: STDLNPPIAD QVHQNMDAPL SHYFIFTGHN SYLTGNQLSS NCSELPIADA LRRGVRVVEL DLWPRGTDDV CVKHGRTLTK EVKLGKCLES IKANAFAISK
201: YPVIITLEDH LTPKLQFKVA KMITQTFGDM LYYHDSQGCQ EFPSPEELKE KILISTKPPK EYLEANDTKE KDNGEKGKDS DEDVWGKEPE DLISTQSDLD
301: KVTSSVNDLN QDDEERGSCE SDTSCQLQAP EYKRLIAIHA GKPKGGLRMA LKVDPNKIRR LSLSEQLLEK AVASYGADVI RFTQKNFLRI YPKGTRFNSS
401: NYKPQIGWMS GAQMIAFNMQ GYGRALWLME GMFRANGGCG YVKKPDFLMD ASPNGQDFYP KDNSSPKKTL KVKVCMGDGW LLDFKKTHFD SYSPPDFFVR
501: VGIAGAPVDE VMEKTKIEYD TWTPIWNKEF TFPLAVPELA LLRVEVHEHD VNEKDDFGGQ TCLPVSEIRQ GIRAVPLFNR KGVKYSSTRL LMRFEFV

Arabidopsis Description

PLC4Phosphoinositide phospholipase C 4 [Source:UniProtKB/Swiss-Prot;Acc:Q944C1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.