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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002625.1-P Field mustard mitochondrion 99.66 99.66
CDX80341 Canola mitochondrion 97.96 97.8
CDY32691 Canola cytosol 90.83 90.07
CDY71544 Canola cytosol 71.48 86.45
AT5G58700.3 Thale cress cytosol 85.4 84.25
CDY69947 Canola cytosol 22.58 63.64
HORVU0Hr1G012510.3 Barley endoplasmic reticulum 44.65 62.17
GSMUA_Achr5P28270_001 Banana plasma membrane 62.14 61.62
CDY01144 Canola cytosol 48.39 60.64
GSMUA_Achr2P18980_001 Banana mitochondrion 60.27 60.58
GSMUA_Achr5P08470_001 Banana mitochondrion 60.61 60.3
GSMUA_AchrUn_... Banana mitochondrion 56.71 58.6
GSMUA_Achr10P... Banana cytosol, mitochondrion 58.57 58.18
CDY27998 Canola cytosol 53.82 58.06
Zm00001d014903_P002 Maize mitochondrion 57.73 58.02
CDY07623 Canola cytosol 58.57 57.98
Zm00001d014906_P003 Maize plasma membrane 57.56 57.85
CDY60344 Canola cytosol 58.91 57.83
TraesCS5D01G160300.1 Wheat mitochondrion 57.56 57.56
HORVU2Hr1G013730.2 Barley cytosol 54.16 57.07
Os07t0694000-01 Rice plasma membrane 57.89 57.02
Os12t0562400-00 Rice plasma membrane 57.05 56.95
CDX74806 Canola cytosol 57.89 56.83
TraesCS2B01G098500.1 Wheat cytosol, mitochondrion 58.4 56.77
CDY47356 Canola mitochondrion 54.16 56.56
TraesCS2D01G082000.1 Wheat cytosol, mitochondrion 58.23 56.51
TraesCS2A01G084000.2 Wheat cytosol, mitochondrion 58.4 56.49
CDY22153 Canola mitochondrion 55.69 56.45
CDY20520 Canola cytosol 58.23 56.41
CDY35983 Canola mitochondrion 56.03 56.41
Zm00001d028746_P001 Maize plastid 56.37 56.37
EER99967 Sorghum cytosol, mitochondrion 58.06 56.34
Zm00001d007229_P001 Maize cytosol, mitochondrion 57.73 56.11
CDY07057 Canola cytosol 57.89 55.9
CDY61706 Canola cytosol 57.73 55.74
CDY70294 Canola mitochondrion 51.61 55.68
EES16479 Sorghum cytosol, mitochondrion 56.88 54.92
CDY27254 Canola mitochondrion 53.99 54.64
OQU82674 Sorghum cytosol, mitochondrion 56.54 54.41
CDX72188 Canola mitochondrion 53.65 54.3
TraesCS4B01G195200.2 Wheat cytosol 58.06 54.03
CDY65008 Canola cytosol 31.92 53.87
TraesCS4D01G195800.1 Wheat cytosol 57.73 53.71
TraesCS4A01G109000.2 Wheat cytosol 57.73 53.71
CDX80342 Canola cytosol 53.31 53.31
CDY52121 Canola cytosol 53.31 53.31
Os03t0289300-00 Rice plasma membrane 56.88 52.43
HORVU4Hr1G056550.2 Barley cytosol 56.37 52.12
CDY70829 Canola cytosol 42.11 49.4
OQU92774 Sorghum cytosol 40.24 48.97
CDX80344 Canola cytosol 46.18 48.66
CDY52120 Canola cytosol, mitochondrion 46.01 48.48
CDY02827 Canola cytosol 43.29 48.39
CDY32694 Canola cytosol 42.95 48.01
CDY71238 Canola cytosol 32.43 47.16
CDX71156 Canola cytosol, mitochondrion 46.69 45.01
CDY61028 Canola cytosol, mitochondrion 46.69 45.01
CDY68902 Canola cytosol 21.39 43.45
CDX75008 Canola cytosol 12.73 43.35
CDY33201 Canola cytosol 8.83 40.62
OQU82766 Sorghum cytosol 46.35 40.21
CDY26989 Canola cytosol, plastid 11.21 33.33
CDY26990 Canola cytosol 3.9 15.97
Protein Annotations
KEGG:00562+3.1.4.11KEGG:04070+3.1.4.11Gene3D:2.60.40.150Gene3D:3.20.20.190MapMan:5.7.2.3.2GO:A0A078IQE1
UniProt:A0A078IQE1InterPro:C2_domInterPro:C2_domain_sfEnsemblPlants:CDY52122ProteinID:CDY52122ProteinID:CDY52122.1
ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0004435GO:GO:0004871GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0006629GO:GO:0007154GO:GO:0007165GO:GO:0008081
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016042GO:GO:0016787
GO:GO:0035556EnsemblPlantsGene:GSBRNA2T00004944001InterPro:IPR000008InterPro:IPR000909InterPro:IPR001711InterPro:IPR017946
InterPro:IPR035892PFAM:PF00168PFAM:PF00387PFAM:PF00388InterPro:PI-PLC_famInterPro:PLC-like_Pdiesterase_TIM-brl
InterPro:PLipase_C_PInositol-sp_X_domInterPro:PLipase_C_Pinositol-sp_YPRINTS:PR00390PFscan:PS50004PFscan:PS50007PFscan:PS50008
PANTHER:PTHR10336PANTHER:PTHR10336:SF101MetaCyc:PWY-6351MetaCyc:PWY-6367MetaCyc:PWY-7039SMART:SM00148
SMART:SM00149SMART:SM00239SUPFAM:SSF49562SUPFAM:SSF51695UniParc:UPI0004EE76CCSEG:seg
Description
BnaA10g29510DPhosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A078IQE1]
Coordinates
chrLK033058:-:63783..66221
Molecular Weight (calculated)
67096.3 Da
IEP (calculated)
8.350
GRAVY (calculated)
-0.580
Length
589 amino acids
Sequence
(BLAST)
001: MGSYRMCLIF KRKFRVTEPG PVDDVRDVFS RYAEGQAHMS PEQLRKLMAD ERREDLGSSL EDAERLVDEV LRRKHHIAKF TRRNLTLEDF NYLLFSTELN
101: PPIGDKVHQN MDAPLSHYFI FTGHNSYLTG NQLSSKCSGL PIADALRKGV RVVELDLWPR GKDDVCVKHG GTLTKAVKLG KCLESIKANA FTTSKYPVII
201: TLEDHLTPKL QSKVAKMITQ TFGEMLYYHD SESCKEFPSP EELKGKILIS TKPPKEYLEA NDAKDGEKGK DSDEDVWGKE PEELISTQSE LDKVSNNINY
301: INQDDEERGS RDFDTSCSLQ APEYKRLIAI HAGKPKGGLK MALKVDPDKI RRLSLSEQLL EKAVASHGAD VIRFTQKNFL RIYPKGTRFN SSNYKPQIGW
401: MSGAQMIAFN MQGYGRALWL MQGMFRANGG CGYVKKPDFL MNVGPNGEVF DPNENSHPKK TLKVKVLMGD GWHLDFKKTH FDRYSPPDFY VRVGIAGAPA
501: DKAMEKTEVK YNTWTPIWNE EFTFQLTVPE LALLRVEVHE YDNNEKDDFG GQTCLPVSEL RQGIRAVPLF NRKGVKYSST RLLMRFEFV
Best Arabidopsis Sequence Match ( AT5G58700.3 )
(BLAST)
001: MEGKKEMGSY KFCLIFTRKF RMTESGPVED VRDLFEKYTE GDAHMSPEQL QKLMTEEGGE GETSLEEAER IVDEVLRRKH HIAKFTRRNL TLDDFNYYLF
101: STDLNPPIAD QVHQNMDAPL SHYFIFTGHN SYLTGNQLSS NCSELPIADA LRRGVRVVEL DLWPRGTDDV CVKHGRTLTK EVKLGKCLES IKANAFAISK
201: YPVIITLEDH LTPKLQFKVA KMITQTFGDM LYYHDSQGCQ EFPSPEELKE KILISTKPPK EYLEANDTKE KDNGEKGKDS DEDVWGKEPE DLISTQSDLD
301: KVTSSVNDLN QDDEERGSCE SDTSCQLQAP EYKRLIAIHA GKPKGGLRMA LKVDPNKIRR LSLSEQLLEK AVASYGADVI RFTQKNFLRI YPKGTRFNSS
401: NYKPQIGWMS GAQMIAFNMQ GYGRALWLME GMFRANGGCG YVKKPDFLMD ASPNGQDFYP KDNSSPKKTL KVKVCMGDGW LLDFKKTHFD SYSPPDFFVR
501: VGIAGAPVDE VMEKTKIEYD TWTPIWNKEF TFPLAVPELA LLRVEVHEHD VNEKDDFGGQ TCLPVSEIRQ GIRAVPLFNR KGVKYSSTRL LMRFEFV
Arabidopsis Description
PLC4Phosphoinositide phospholipase C 4 [Source:UniProtKB/Swiss-Prot;Acc:Q944C1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.