CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80344	Canola	cytosol	95.71	95.71
CDY71238	Canola	cytosol	69.05	95.31
Bra002627.1-P	Field mustard	cytosol	90.7	95.12
CDY02827	Canola	cytosol	84.44	89.56
CDY32694	Canola	cytosol	84.44	89.56
AT5G58670.1	Thale cress	cytosol	85.51	85.2
CDY61028	Canola	cytosol, mitochondrion	89.09	81.51
CDX71156	Canola	cytosol, mitochondrion	88.91	81.34
CDY68902	Canola	cytosol	33.99	65.52
CDY70829	Canola	cytosol	56.35	62.75
CDY65008	Canola	cytosol	36.67	58.74
KRH72676	Soybean	cytosol, mitochondrion	37.03	55.05
CDY01144	Canola	cytosol	45.44	54.04
PGSC0003DMT400078046	Potato	cytosol	41.68	52.71
CDY70294	Canola	mitochondrion	51.16	52.38
CDY69947	Canola	cytosol	19.32	51.67
KRH17039	Soybean	cytosol, mitochondrion	53.13	51.56
CDY47356	Canola	mitochondrion	51.88	51.42
CDY71544	Canola	cytosol	44.01	50.51
CDY27998	Canola	cytosol	49.2	50.37
Solyc06g082000.2.1	Tomato	cytosol	50.98	50.35
CDX72188	Canola	mitochondrion	52.24	50.17
VIT_06s0004g06670.t01	Wine grape	cytosol	52.06	50.09
CDY35983	Canola	mitochondrion	52.41	50.09
CDY27254	Canola	mitochondrion	52.06	50.0
CDY22153	Canola	mitochondrion	51.88	49.91
GSMUA_Achr10P...	Banana	mitochondrion	45.98	49.81
HORVU1Hr1G014570.19	Barley	mitochondrion	50.8	48.71
TraesCS1D01G071800.3	Wheat	mitochondrion	51.52	48.65
TraesCS1A01G069300.1	Wheat	mitochondrion	50.8	48.55
Os05t0127200-01	Rice	plasma membrane	51.16	47.83
HORVU1Hr1G014580.9	Barley	mitochondrion	50.98	46.72
CDY52122	Canola	cytosol, mitochondrion	48.48	46.01
OQU77319	Sorghum	mitochondrion	49.2	45.68
CDX80341	Canola	mitochondrion	48.12	45.59
CDY32691	Canola	cytosol	48.12	45.29
CDY61706	Canola	cytosol	49.2	45.08
CDY07057	Canola	cytosol	49.02	44.92
CDY07623	Canola	cytosol	47.59	44.71
CDY60344	Canola	cytosol	47.94	44.67
CDX74806	Canola	cytosol	47.76	44.5
CDY20520	Canola	cytosol	48.12	44.24
CDY52121	Canola	cytosol	45.44	43.12
CDX80342	Canola	cytosol	45.08	42.78
Zm00001d047447_P002	Maize	extracellular	48.84	41.05
CDY33201	Canola	cytosol	8.77	38.28
CDX75008	Canola	cytosol	11.27	36.42
CDY26989	Canola	cytosol, plastid	10.55	29.8
CDY26990	Canola	cytosol	4.47	17.36

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	GO:A0A078IM21
UniProt:A0A078IM21	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDY52120	ProteinID:CDY52120	ProteinID:CDY52120.1
InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787
GO:GO:0035556	EnsemblPlantsGene:GSBRNA2T00004941001	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946
InterPro:IPR035892	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl
InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008
PANTHER:PTHR10336	PANTHER:PTHR10336:SF92	MetaCyc:PWY-6351	MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00148
SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI0004EF255E
SEG:seg	:	:	:	:	:

Description

BnaA10g29490DPhosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A078IM21]

Coordinates

chrLK033058:-:51710..54330

Molecular Weight (calculated)

63899.2 Da

IEP (calculated)

6.758

GRAVY (calculated)

-0.478

Length

559 amino acids

Sequence
(BLAST)

001: MKVTFKVCFC CARSFKVKSS EPPQEIKTLF DNYSENGRMS EDEMLRFVIQ VQGETHADSN YVKDIFNMLK HHGVFHPRGL HLEEFYRYLL SDFNSPLPLS
101: GEVWQDMTQP LSHYFLYTGH NSYLTGNQLN SRSSTEPIVK ALRSGVRVIE LDLWPNSSGT EAEVRHGGTL TSTEDLQKCL NAVKENAFLV SEYPVVLTLE
201: DHLPPDLQKK VAKMVSKTFG ETLFRCTTNE HTECFPSPEA LKNKILISTK PPKEYLQTQV SLGSTTDESV KAKKVKEAEE LIQDEDEETV AIEYRDLISI
301: HAGNRKGGMK NCLNGDPNRV IRLSMSEQWL ETLAKTRGPD LVKFTQRNIL RIFPKTARID SSNYDPLVGW IHGAQMVAFN MQSHGRFLWM MQGMFKANGG
401: CGYVKKPDVL LSNGPGGETF DPSSKTLQIK TVLKIKIYNG EGWNMDFSQD HFDRYSPPDF YARARIPLDT TSHKTETDTD EWFPVWDKEF EFPLRVPELA
501: LLYIIVKDYD SNTQNDFAGQ ICLPLSEIRP GIRAVRLHDR AGEVYKHARL LVRFVLEPR

Best Arabidopsis Sequence Match ( AT5G58670.1 )
(BLAST)

001: MKESFKVCFC CVRNFKVKSS EPPEEIKNLF HDYSQDDRMS ADEMLRFVIQ VQGETHADIN YVKDIFHRLK HHGVFHPRGI HLEGFYRYLL SDFNSPLPLT
101: REVWQDMNQP LSHYFLYTGH NSYLTGNQLN SNSSIEPIVK ALRNGVRVIE LDLWPNSSGK EAEVRHGGTL TSREDLQKCL NVVKENAFQV SAYPVVLTLE
201: DHLTPILQKK VAKMVSKTFG GSLFQCTDET TECFPSPESL KNKILISTKP PKEYLQTQIS KGSTTDESTR AKKISDAEEQ VQEEDEESVA IEYRDLISIH
301: AGNRKGGLKN CLNGDPNRVI RLSMSEQWLE TLAKTRGPDL VKFTQRNLLR IFPKTTRFDS SNYDPLVGWI HGAQMVAFNM QSHGRYLWMM QGMFKANGGC
401: GYVKKPDVLL SNGPEGEIFD PCSQNLPIKT TLKVKIYTGE GWNMDFPLDH FDRYSPPDFY AKVGIAGVPL DTASYRTEID KDEWFPIWDK EFEFPLRVPE
501: LSLLCITVKD YDSNTQNDFA GQTCFPLSEV RPGIRAVRLH DRAGEVYKHV RLLMRFVLEP R

Arabidopsis Description

PLC1Phosphoinositide phospholipase C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39032]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.