CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040049.1-P	Field mustard	cytosol	93.12	99.82
CDY27998	Canola	cytosol	87.61	93.22
CDY35983	Canola	mitochondrion	93.63	92.99
AT3G08510.1	Thale cress	mitochondrion	91.74	91.74
CDY70294	Canola	mitochondrion	76.59	81.5
CDY27254	Canola	mitochondrion	80.55	80.41
CDX72188	Canola	mitochondrion	80.03	79.9
CDY47356	Canola	mitochondrion	73.49	75.71
CDY01144	Canola	cytosol	60.76	75.11
VIT_13s0067g00900.t01	Wine grape	mitochondrion	72.29	70.83
KRH31148	Soybean	mitochondrion	70.57	69.26
KRH73190	Soybean	endoplasmic reticulum	71.43	69.17
KRH14945	Soybean	mitochondrion	71.43	69.17
KRG97732	Soybean	mitochondrion	70.4	69.09
Solyc05g052760.2.1	Tomato	plastid	68.5	68.27
PGSC0003DMT400069760	Potato	mitochondrion	68.5	68.03
PGSC0003DMT400016945	Potato	endoplasmic reticulum	56.28	66.19
Solyc06g051620.2.1	Tomato	cytosol, mitochondrion	62.82	64.6
CDY69947	Canola	cytosol	21.86	60.77
CDY71544	Canola	cytosol	50.09	59.75
GSMUA_Achr10P...	Banana	mitochondrion	51.81	58.33
CDY60344	Canola	cytosol	58.0	56.17
CDY07623	Canola	cytosol	57.49	56.13
CDY07057	Canola	cytosol	58.52	55.74
CDY52122	Canola	cytosol, mitochondrion	56.45	55.69
CDY61706	Canola	cytosol	58.35	55.57
CDY32691	Canola	cytosol	56.45	55.22
CDX80341	Canola	mitochondrion	55.94	55.08
CDX74806	Canola	cytosol	56.63	54.83
CDY20520	Canola	cytosol	57.14	54.61
HORVU1Hr1G014570.19	Barley	mitochondrion	54.04	53.86
TraesCS1A01G069300.1	Wheat	mitochondrion	53.87	53.5
TraesCS1D01G071800.3	Wheat	mitochondrion	54.04	53.04
CDY70829	Canola	cytosol	45.44	52.59
CDY65008	Canola	cytosol	31.5	52.44
Os05t0127200-01	Rice	plasma membrane	53.87	52.34
OQU77319	Sorghum	mitochondrion	54.22	52.33
CDY52120	Canola	cytosol, mitochondrion	49.91	51.88
HORVU1Hr1G014580.9	Barley	mitochondrion	54.22	51.64
CDY52121	Canola	cytosol	52.32	51.61
CDX80342	Canola	cytosol	52.15	51.44
CDY02827	Canola	cytosol	46.64	51.42
CDY32694	Canola	cytosol	46.47	51.23
CDX80344	Canola	cytosol	49.23	51.16
CDY71238	Canola	cytosol	35.11	50.37
CDX71156	Canola	cytosol, mitochondrion	50.77	48.28
CDY61028	Canola	cytosol, mitochondrion	50.6	48.12
CDY68902	Canola	cytosol	23.75	47.59
CDX75008	Canola	cytosol	13.94	46.82
Zm00001d047447_P002	Maize	extracellular	53.53	46.77
CDY33201	Canola	cytosol	9.47	42.97
CDY26989	Canola	cytosol, plastid	11.36	33.33
CDY26990	Canola	cytosol	4.13	16.67

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	Gene3D:2.60.40.150	MapMan:5.7.2.3.2	GO:A0A078GBT7
UniProt:A0A078GBT7	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDY22153	ProteinID:CDY22153	ProteinID:CDY22153.1
ncoils:Coil	InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042
GO:GO:0016787	GO:GO:0035556	EnsemblPlantsGene:GSBRNA2T00018551001	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711
InterPro:IPR017946	InterPro:IPR035892	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	PFAM:PF09279
InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390
PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF92	MetaCyc:PWY-6351
MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473
SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI0004EEE8C5	SEG:seg	:	:

Description

BnaC01g39480DPhosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A078GBT7]

Coordinates

chrLK032128:-:222417..225565

Molecular Weight (calculated)

66289.9 Da

IEP (calculated)

6.282

GRAVY (calculated)

-0.493

Length

581 amino acids

Sequence
(BLAST)

001: MSKQTYRVCF CFNRRFRYTA SEAPRDVKTL FEKYSENGVM TVDHLQRFLI DVQKQDKATK EDAQSIINAA SSLLHRNGLH LDAFFKYLFG DSNPPLALHE
101: VHQDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKNDI DVLHGRTLTS PVELIKCLRA IKTHAFEVSD YPVVVTLEDH
201: LTPELQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDED VVQKGKALGD EEVWGREVPS FIERNKSGDK DDLDDEEDND
301: EDDDVEKFKK NAPPQYKHLI AIHAGKPKGG ITACLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQQN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD ILLKGGSDSD IFDPKVTLPV KTTLRVTIYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PADTVMKKTK
501: TLEDNWVPSW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELQEGIRSFP LHSRKGEKYK SVKLLVRCEF V

Best Arabidopsis Sequence Match ( AT3G08510.1 )
(BLAST)

001: MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PGDTVMKKTK
501: TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V

Arabidopsis Description

PLC2Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A178VDK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.