Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G55940.1 | CDX89318 | AT4G26630.1 | 25387881 |
| AT3G55940.1 | CDX94304 | AT4G26630.1 | 25387881 |
| AT3G55940.1 | CDX97358 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47356 | Canola | mitochondrion | 95.74 | 79.79 |
| CDY27998 | Canola | cytosol | 75.53 | 65.02 |
| CDY70294 | Canola | mitochondrion | 74.04 | 63.74 |
| AT3G55940.1 | Thale cress | mitochondrion | 78.94 | 63.53 |
| CDY27254 | Canola | mitochondrion | 78.3 | 63.23 |
| PGSC0003DMT400016945 | Potato | endoplasmic reticulum | 66.38 | 63.16 |
| CDX72188 | Canola | mitochondrion | 78.09 | 63.06 |
| CDY22153 | Canola | mitochondrion | 75.11 | 60.76 |
| CDY35983 | Canola | mitochondrion | 75.11 | 60.34 |
| CDY69947 | Canola | cytosol | 26.17 | 58.85 |
| CDY71544 | Canola | cytosol | 59.57 | 57.49 |
| VIT_13s0067g00900.t01 | Wine grape | mitochondrion | 70.85 | 56.16 |
| GSMUA_Achr10P... | Banana | mitochondrion | 61.49 | 56.01 |
| Solyc05g052760.2.1 | Tomato | plastid | 68.3 | 55.06 |
| KRG97732 | Soybean | mitochondrion | 68.94 | 54.73 |
| KRH31148 | Soybean | mitochondrion | 68.72 | 54.56 |
| PGSC0003DMT400069760 | Potato | mitochondrion | 67.87 | 54.53 |
| KRH14945 | Soybean | mitochondrion | 69.15 | 54.17 |
| KRH73190 | Soybean | endoplasmic reticulum | 68.94 | 54.0 |
| CDY65008 | Canola | cytosol | 40.0 | 53.87 |
| Solyc06g051620.2.1 | Tomato | cytosol, mitochondrion | 64.68 | 53.81 |
| CDY52122 | Canola | cytosol, mitochondrion | 60.64 | 48.39 |
| CDY32691 | Canola | cytosol | 61.06 | 48.32 |
| CDX80341 | Canola | mitochondrion | 60.0 | 47.8 |
| CDY07623 | Canola | cytosol | 59.79 | 47.23 |
| CDX74806 | Canola | cytosol | 60.21 | 47.17 |
| CDY61706 | Canola | cytosol | 61.06 | 47.05 |
| CDY07057 | Canola | cytosol | 60.85 | 46.89 |
| CDY20520 | Canola | cytosol | 60.64 | 46.88 |
| CDY60344 | Canola | cytosol | 59.79 | 46.83 |
| HORVU1Hr1G014570.19 | Barley | mitochondrion | 58.09 | 46.83 |
| TraesCS1A01G069300.1 | Wheat | mitochondrion | 57.23 | 45.98 |
| CDY70829 | Canola | cytosol | 48.72 | 45.62 |
| CDX80344 | Canola | cytosol | 54.26 | 45.62 |
| OQU77319 | Sorghum | mitochondrion | 58.3 | 45.51 |
| TraesCS1D01G071800.3 | Wheat | mitochondrion | 57.23 | 45.44 |
| CDY52120 | Canola | cytosol, mitochondrion | 54.04 | 45.44 |
| Os05t0127200-01 | Rice | plasma membrane | 57.66 | 45.32 |
| CDY32694 | Canola | cytosol | 50.43 | 44.97 |
| HORVU1Hr1G014580.9 | Barley | mitochondrion | 58.09 | 44.75 |
| CDY02827 | Canola | cytosol | 50.0 | 44.59 |
| CDY52121 | Canola | cytosol | 54.04 | 43.12 |
| CDX80342 | Canola | cytosol | 53.83 | 42.95 |
| CDX71156 | Canola | cytosol, mitochondrion | 55.74 | 42.88 |
| CDY61028 | Canola | cytosol, mitochondrion | 55.53 | 42.72 |
| CDY71238 | Canola | cytosol | 36.38 | 42.22 |
| CDX75008 | Canola | cytosol | 15.11 | 41.04 |
| Zm00001d047447_P002 | Maize | extracellular | 56.6 | 40.0 |
| CDY33201 | Canola | cytosol | 10.85 | 39.84 |
| CDY68902 | Canola | cytosol | 21.7 | 35.17 |
| CDY26989 | Canola | cytosol, plastid | 14.26 | 33.84 |
| CDY26990 | Canola | cytosol | 4.89 | 15.97 |
Protein Annotations
| KEGG:00562+3.1.4.11 | KEGG:04070+3.1.4.11 | Gene3D:2.60.40.150 | Gene3D:3.20.20.190 | MapMan:5.7.2.3.2 | GO:A0A078EK88 |
| InterPro:C2_dom | InterPro:C2_domain_sf | EnsemblPlants:CDY01144 | ProteinID:CDY01144 | ProteinID:CDY01144.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004435 | GO:GO:0006629 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008081 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0035556 | EnsemblPlantsGene:GSBRNA2T00111219001 |
| InterPro:IPR000008 | InterPro:IPR000909 | InterPro:IPR001711 | InterPro:IPR017946 | InterPro:IPR035892 | PFAM:PF00168 |
| PFAM:PF00387 | PFAM:PF00388 | InterPro:PI-PLC_fam | InterPro:PLC-like_Pdiesterase_TIM-brl | InterPro:PLipase_C_PInositol-sp_X_dom | InterPro:PLipase_C_Pinositol-sp_Y |
| PRINTS:PR00390 | PFscan:PS50004 | PFscan:PS50007 | PFscan:PS50008 | PANTHER:PTHR10336 | PANTHER:PTHR10336:SF92 |
| MetaCyc:PWY-6351 | MetaCyc:PWY-6367 | MetaCyc:PWY-7039 | SMART:SM00148 | SMART:SM00149 | SMART:SM00239 |
| SUPFAM:SSF49562 | SUPFAM:SSF51695 | UniParc:UPI0004EE474A | SEG:seg | : | : |
Description
BnaA04g06750D
Coordinates
chrLK031924:+:468708..470893
Molecular Weight (calculated)
52806.8 Da
IEP (calculated)
4.629
GRAVY (calculated)
-0.365
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDPLSHYFI FTGHNSYLTG NQLSSDCSEV PIIEALQKGV KVIELDLWPN SDEDGIDVVH GRTLTSPVEL IKCLRAIKAH AFDVSDYPVV VTLEDHLTPQ
101: LQAKVAEMLT ETFGDMLFAP PPGECLKELP SPDFLKKRIL ISTKPPKEYK ESKHEHVVNK GNNTSGGVLF IYSSFSLQNV SEGDEDEDED EDDDDEVDQV
201: TKSAAPEYKH LIAIQAGKPK GGMTECLKVD PDKVRRLSLS EEQLEDASEK YGTQIVRFTQ QNVLRIYPKG TRIMSSNYDP LVGWSHGAQM VAFNMQGQGK
301: SLWIMRGMFR ANGGCGYVKK PDILLNNNAI FDPQASLPVK TTLRVTIYMG EGWYDDFPRT HFDSYSPPDF YARVGIAGVP VDTVMKKTKT LEDDWIPAWE
401: EVFEFPLTVP QLALLRIEVL DYDMSEKDDF GGQTCLPVSE LRQGIRAVPL HNEDGVKCRS VKLLVRFDFV
101: LQAKVAEMLT ETFGDMLFAP PPGECLKELP SPDFLKKRIL ISTKPPKEYK ESKHEHVVNK GNNTSGGVLF IYSSFSLQNV SEGDEDEDED EDDDDEVDQV
201: TKSAAPEYKH LIAIQAGKPK GGMTECLKVD PDKVRRLSLS EEQLEDASEK YGTQIVRFTQ QNVLRIYPKG TRIMSSNYDP LVGWSHGAQM VAFNMQGQGK
301: SLWIMRGMFR ANGGCGYVKK PDILLNNNAI FDPQASLPVK TTLRVTIYMG EGWYDDFPRT HFDSYSPPDF YARVGIAGVP VDTVMKKTKT LEDDWIPAWE
401: EVFEFPLTVP QLALLRIEVL DYDMSEKDDF GGQTCLPVSE LRQGIRAVPL HNEDGVKCRS VKLLVRFDFV
001: MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PGDTVMKKTK
501: TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PGDTVMKKTK
501: TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V
Arabidopsis Description
PLC2Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A178VDK7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.