CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32694	Canola	cytosol	96.96	96.96
CDX80344	Canola	cytosol	90.13	84.97
CDY52120	Canola	cytosol, mitochondrion	89.56	84.44
CDY71238	Canola	cytosol	64.14	83.46
AT5G58670.1	Thale cress	cytosol	85.39	80.21
CDX71156	Canola	cytosol, mitochondrion	86.53	74.63
CDY61028	Canola	cytosol, mitochondrion	86.15	74.3
CDY68902	Canola	cytosol	35.86	65.17
CDY70829	Canola	cytosol	57.87	60.76
CDY65008	Canola	cytosol	37.38	56.45
KRH72676	Soybean	cytosol, mitochondrion	38.52	53.99
CDY01144	Canola	cytosol	44.59	50.0
KRH17039	Soybean	cytosol, mitochondrion	53.51	48.96
CDY71544	Canola	cytosol	44.59	48.25
CDY70294	Canola	mitochondrion	49.72	47.99
PGSC0003DMT400078046	Potato	cytosol	40.23	47.96
CDY47356	Canola	mitochondrion	50.85	47.52
Solyc06g082000.2.1	Tomato	cytosol	50.28	46.82
CDY22153	Canola	mitochondrion	51.42	46.64
CDY27998	Canola	cytosol	48.2	46.52
CDY35983	Canola	mitochondrion	51.61	46.5
VIT_06s0004g06670.t01	Wine grape	cytosol	51.23	46.47
CDX72188	Canola	mitochondrion	50.85	46.05
GSMUA_Achr10P...	Banana	mitochondrion	44.97	45.93
CDY27254	Canola	mitochondrion	50.66	45.88
TraesCS1D01G071800.3	Wheat	mitochondrion	50.66	45.1
TraesCS1A01G069300.1	Wheat	mitochondrion	49.91	44.96
HORVU1Hr1G014570.19	Barley	mitochondrion	49.72	44.94
Os05t0127200-01	Rice	plasma membrane	50.66	44.65
CDX80341	Canola	mitochondrion	48.58	43.39
CDY52122	Canola	cytosol, mitochondrion	48.39	43.29
HORVU1Hr1G014580.9	Barley	mitochondrion	49.91	43.11
CDY69947	Canola	cytosol	17.08	43.06
CDY32691	Canola	cytosol	48.01	42.59
OQU77319	Sorghum	mitochondrion	48.39	42.36
CDY07623	Canola	cytosol	47.82	42.35
CDY60344	Canola	cytosol	48.01	42.17
CDY61706	Canola	cytosol	48.2	41.64
CDY07057	Canola	cytosol	48.01	41.48
CDX74806	Canola	cytosol	46.87	41.17
CDY52121	Canola	cytosol	45.92	41.09
CDY20520	Canola	cytosol	47.06	40.79
CDX80342	Canola	cytosol	45.54	40.75
CDY33201	Canola	cytosol	9.68	39.84
CDX75008	Canola	cytosol	12.9	39.31
Zm00001d047447_P002	Maize	extracellular	48.2	38.2
CDY26989	Canola	cytosol, plastid	11.76	31.31
CDY26990	Canola	cytosol	4.36	15.97

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2
GO:A0A078ENZ3	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDY02827	ProteinID:CDY02827	ProteinID:CDY02827.1
InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0035556	EnsemblPlantsGene:GSBRNA2T00115017001	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946
InterPro:IPR035892	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	PFAM:PF09279	InterPro:PI-PLC_fam
InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004
PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF105	MetaCyc:PWY-6351	MetaCyc:PWY-6367
MetaCyc:PWY-7039	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562
SUPFAM:SSF51695	UniParc:UPI0004EDDB60	:	:	:	:

Description

BnaC02g10620D

Coordinates

chrLK031937:-:680142..682825

Molecular Weight (calculated)

59633.6 Da

IEP (calculated)

6.287

GRAVY (calculated)

-0.483

Length

527 amino acids

Sequence
(BLAST)

001: MKESFKVCFC CVRSFKVKTS EPPQEIKTLF EDYSGDGRMS VDEMLTFVIQ VQGENHADSN YVKDIFNRLK HHGVFHPRGI HLEGFYRYLL SDFNSPLPPS
101: GQVWQDMNQP LSHYFLYTGH NSYLTGNQLN SKSSTEPIVK ALKSGVRVIE LDLWPNSSGT EAEVRHGGTL TSTEDLQKCL NAVKENAFEV SEYPVVLTLE
201: DHLPPDLQKK VAKMVSKTFG GTLFRCTEEY KERFPSPEAL KNKILISTKP PKEYLQTQVS QSATTDESVK SKKVADAEEL IQDEDEDTVA VEYRDLISIH
301: AGNRKGGLKN CLNGDPNRTT RFDSSNYDPL VGWIHGAQMV AFNMQSHGRF LWMMQGMFKA NGGCGYVKKP DVLLSNGPGG ETFDPSSKSL QIKTVLKVKI
401: YNGEGWNLDF PQDYFDRYSP PDFYAKASIG IAGIPLDTTS YRTETDADEW FPVWDKEFVF PLRVPELALL YITVKDYDSN TQNDFAGQTC LPLSEIRPGI
501: RAVRLHDRAG EVLKHARLLV RFVLEPR

Best Arabidopsis Sequence Match ( AT5G58670.1 )
(BLAST)

001: MKESFKVCFC CVRNFKVKSS EPPEEIKNLF HDYSQDDRMS ADEMLRFVIQ VQGETHADIN YVKDIFHRLK HHGVFHPRGI HLEGFYRYLL SDFNSPLPLT
101: REVWQDMNQP LSHYFLYTGH NSYLTGNQLN SNSSIEPIVK ALRNGVRVIE LDLWPNSSGK EAEVRHGGTL TSREDLQKCL NVVKENAFQV SAYPVVLTLE
201: DHLTPILQKK VAKMVSKTFG GSLFQCTDET TECFPSPESL KNKILISTKP PKEYLQTQIS KGSTTDESTR AKKISDAEEQ VQEEDEESVA IEYRDLISIH
301: AGNRKGGLKN CLNGDPNRVI RLSMSEQWLE TLAKTRGPDL VKFTQRNLLR IFPKTTRFDS SNYDPLVGWI HGAQMVAFNM QSHGRYLWMM QGMFKANGGC
401: GYVKKPDVLL SNGPEGEIFD PCSQNLPIKT TLKVKIYTGE GWNMDFPLDH FDRYSPPDFY AKVGIAGVPL DTASYRTEID KDEWFPIWDK EFEFPLRVPE
501: LSLLCITVKD YDSNTQNDFA GQTCFPLSEV RPGIRAVRLH DRAGEVYKHV RLLMRFVLEP R

Arabidopsis Description

PLC1Phosphoinositide phospholipase C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39032]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.