CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039499.1-P	Field mustard	cytosol	85.35	56.9
CDY26990	Canola	cytosol	21.72	29.86
CDY65008	Canola	cytosol	28.28	16.05
CDX75008	Canola	cytosol	13.64	15.61
CDY01144	Canola	cytosol	33.84	14.26
CDY71544	Canola	cytosol	33.84	13.76
CDY69947	Canola	cytosol	14.14	13.4
CDY27998	Canola	cytosol	32.83	11.9
CDY02827	Canola	cytosol	31.31	11.76
CDY32694	Canola	cytosol	31.31	11.76
CDY47356	Canola	mitochondrion	33.33	11.7
CDY35983	Canola	mitochondrion	33.84	11.45
CDY52121	Canola	cytosol	33.84	11.38
CDY22153	Canola	mitochondrion	33.33	11.36
CDY70294	Canola	mitochondrion	31.31	11.36
CDY32691	Canola	cytosol	33.84	11.28
CDX80342	Canola	cytosol	33.33	11.21
CDY52122	Canola	cytosol, mitochondrion	33.33	11.21
CDX80341	Canola	mitochondrion	33.33	11.19
CDX72188	Canola	mitochondrion	32.32	11.0
CDY27254	Canola	mitochondrion	32.32	11.0
CDY07057	Canola	cytosol	33.84	10.98
CDY61706	Canola	cytosol	33.84	10.98
CDY20520	Canola	cytosol	33.33	10.86
CDX74806	Canola	cytosol	32.83	10.83
CDY07623	Canola	cytosol	31.82	10.59
CDX80344	Canola	cytosol	29.8	10.55
CDY52120	Canola	cytosol, mitochondrion	29.8	10.55
CDY60344	Canola	cytosol	31.82	10.5
CDY61028	Canola	cytosol, mitochondrion	32.32	10.47
CDX71156	Canola	cytosol, mitochondrion	32.32	10.47
CDY33201	Canola	cytosol	6.06	9.38
CDY70829	Canola	cytosol	22.73	8.96
CDY68902	Canola	cytosol	6.06	4.14
CDY71238	Canola	cytosol	7.58	3.7

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	MapMan:5.7.2.3.2	GO:A0A078GP30	UniProt:A0A078GP30	InterPro:C2_dom
EnsemblPlants:CDY26989	ProteinID:CDY26989	ProteinID:CDY26989.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0035556	EnsemblPlantsGene:GSBRNA2T00036765001
InterPro:IPR000008	PFAM:PF00168	InterPro:PI-PLC_fam	PFscan:PS50004	PANTHER:PTHR10336	PANTHER:PTHR10336:SF92
MetaCyc:PWY-6351	MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0004EF280D

Description

BnaC06g12050DBnaC06g12050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GP30]

Coordinates

chrLK032198:-:33696..35486

Molecular Weight (calculated)

22141.8 Da

IEP (calculated)

10.368

GRAVY (calculated)

-0.413

Length

198 amino acids

Sequence
(BLAST)

001: MAFGWPLQEP DRPSSGKAVK QDLPKASNTL KEPDRPSSSK SVKQDLPKAS NTLKGTDDPS TNIAIIPATN KKTLKVKIYM GTGWDTDFPK LHRGSSPDLF
101: VNAINSLMIH GGKIQKTVHK RSWTPSWGGE FVFPLSSLEN DELVVEVYDH TLIFKDKFAG TFRLWVSKLK PGIQVIPLSD EVGKQCRTAR LLMRFMFV

Best Arabidopsis Sequence Match ( AT3G47290.1 )
(BLAST)

001: MLVTRRWESH PANSPDLILQ FFGNEFHGYG DDMPETLRRL TELLGYEKEE DGAGMNAAKK IAAELNRRKD DIPAFRRLRC LELDQLNEFL FSTKLNPPIG
101: DQVHHDMHAP LSHYFIHTSL NSYFTGNVFG KYSILPIIEA LEQGVRVVEL DLWPDGRGSI CVRPSWNFEK PLKLQECLDS IKEHAFTKCT YPLIITFKDG
201: LKPELQSKAT QMIQQTFNHM VYHHDPHSLE VFPSPQQLRN KILISRRPPK ELLYANDDDG KVGVRNGVEI RQHPADPNYQ SLVSFHVVEP RGMLQNVLTG
301: KANKIQRPGW YETDIISFTQ KRFLRTRPQR KLLIYAPYKP QRAWMHGAQL IALSRKEEKE KLWLMQGMFR ANGGCGYVKK PDFLLNAGPS GVFYPTVNPV
401: VVKILKVKIY MGDGWIVDFK KRIGRLSKPD LYVRISIAGV PHDENIMKTT VKNNEWTPTW GEEFTFPLTY PDLALISFEV YDYEVSTADA FCGQTCLPVS
501: ELIEGIRAVP LYDERGKACS STMLLTRFKW S

Arabidopsis Description

ATPLC8Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.