CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17039	Soybean	cytosol, mitochondrion	90.16	58.85
CDY02827	Canola	cytosol	53.99	38.52
CDY32694	Canola	cytosol	53.72	38.33
Bra020361.1-P	Field mustard	cytosol	53.72	38.26
AT5G58670.1	Thale cress	cytosol	56.12	37.61
PGSC0003DMT400078046	Potato	cytosol	44.15	37.56
KRH14945	Soybean	mitochondrion	59.31	37.17
KRG97734	Soybean	cytosol	55.05	37.16
CDY52120	Canola	cytosol, mitochondrion	55.05	37.03
KRG97732	Soybean	mitochondrion	58.24	36.99
CDX80344	Canola	cytosol	54.79	36.85
VIT_06s0004g06670.t01	Wine grape	cytosol	56.91	36.83
Solyc06g082000.2.1	Tomato	cytosol	55.32	36.75
KRH73190	Soybean	endoplasmic reticulum	58.51	36.67
KRH31148	Soybean	mitochondrion	57.71	36.66
CDY70829	Canola	cytosol	48.94	36.65
AT4G38530.1	Thale cress	cytosol	54.79	36.52
Bra002627.1-P	Field mustard	cytosol	51.06	36.02
KRH14947	Soybean	cytosol, mitochondrion	55.59	35.07
Bra006749.1-P	Field mustard	cytosol, mitochondrion	56.65	34.86
CDX71156	Canola	cytosol, mitochondrion	56.38	34.7
CDY61028	Canola	cytosol, mitochondrion	56.38	34.7
KRH73189	Soybean	cytosol	55.59	34.6
CDY71238	Canola	cytosol	36.97	34.32
KRH31146	Soybean	nucleus	55.05	33.93
Bra033567.1-P	Field mustard	cytosol	47.61	33.77
GSMUA_Achr10P...	Banana	mitochondrion	45.21	32.95
TraesCS1A01G069300.1	Wheat	mitochondrion	51.06	32.82
CDY65008	Canola	cytosol	30.32	32.66
TraesCS1D01G071800.3	Wheat	mitochondrion	51.33	32.6
HORVU1Hr1G014570.19	Barley	mitochondrion	50.53	32.59
CDY68902	Canola	cytosol	24.73	32.07
KRH14952	Soybean	cytosol	32.98	31.88
KRH31144	Soybean	cytosol	49.2	31.73
KRH14948	Soybean	cytosol	50.8	31.68
HORVU1Hr1G014580.9	Barley	mitochondrion	51.06	31.48
Os05t0127200-01	Rice	plasma membrane	50.0	31.44
OQU77319	Sorghum	mitochondrion	50.0	31.23
KRH73188	Soybean	cytosol	48.4	30.64
KRG97735	Soybean	cytosol	49.47	29.9
Zm00001d047447_P002	Maize	extracellular	49.73	28.12

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	EntrezGene:100803394	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2
UniProt:A0A0R0L9Z2	EMBL:ACUP02001230	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	EnsemblPlantsGene:GLYMA_02G226800
GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556
InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	EnsemblPlants:KRH72676
ProteinID:KRH72676	ProteinID:KRH72676.1	PFAM:PF00168	PFAM:PF00387	PFAM:PF09279	InterPro:PI-PLC_fam
InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004
PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF92	MetaCyc:PWY-6351	MetaCyc:PWY-6367
MetaCyc:PWY-7039	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562
SUPFAM:SSF51695	UniParc:UPI0006EDBA3D	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:41369419..41374792

Molecular Weight (calculated)

43107.8 Da

IEP (calculated)

7.536

GRAVY (calculated)

-0.299

Length

376 amino acids

Sequence
(BLAST)

001: MATTSRHLSH IKMPKQHFKV CFCFRRMFRL KVADEPPDEI DILFKEYSQH GIMSMDDLCD FLVQFQGEEE GVAIKKHAQT IFDSLRHLNI FHRRGLHVEA
101: FFRYLLSDLN VPLAEVHHDM NFPLAHYFLY TGHNSYLTGN QVSSASSTSA IIKALKKGVR VIELDLWPNS RGDDVLVHHG GFTQKNLLRI YPKGTRLNSS
201: NYDPMIGWMH GAQMVAFNMQ GGGHHLRYME GIFGANGGCG YVKKPDILLN VGPNNEVFDP RAIRPVQKIL QVLVYMGEGW RSDFGPTHFD FYSPPDFRVQ
301: VGIRGVPDDK DTKYSRTIED DWVPVWNEEF SFPLTVPELA LFYIKVVERD FSGRHDFGGQ TCLPVSELRQ GIRAVR

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.