CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14947	Soybean	cytosol, mitochondrion	92.72	93.96
KRG97734	Soybean	cytosol	69.7	75.58
KRH31146	Soybean	nucleus	69.21	68.52
CDY69947	Canola	cytosol	21.52	62.2
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	60.43	61.76
VIT_13s0067g00890.t01	Wine grape	cytosol	60.26	61.49
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	60.26	61.38
CDY60344	Canola	cytosol	60.6	61.0
CDY07623	Canola	cytosol	59.93	60.84
KRH14948	Soybean	cytosol	60.43	60.53
Bra000168.1-P	Field mustard	cytosol	60.6	60.4
CDY61706	Canola	cytosol	60.76	60.16
CDY07057	Canola	cytosol	60.6	60.0
AT2G40116.1	Thale cress	cytosol	60.76	59.87
CDX74806	Canola	cytosol	59.27	59.67
Bra017030.1-P	Field mustard	cytosol	58.94	59.63
Bra004987.1-P	Field mustard	cytosol	59.93	59.44
KRH73188	Soybean	cytosol	58.11	59.09
CDY20520	Canola	cytosol	59.27	58.88
KRH31148	Soybean	mitochondrion	56.95	58.11
KRH14945	Soybean	mitochondrion	57.62	58.0
KRG97732	Soybean	mitochondrion	56.79	57.94
KRH73190	Soybean	endoplasmic reticulum	57.28	57.67
KRH31144	Soybean	cytosol	55.46	57.46
KRH72676	Soybean	cytosol, mitochondrion	34.6	55.59
KRG97735	Soybean	cytosol	56.29	54.66
KRH17039	Soybean	cytosol, mitochondrion	50.17	52.6
KRH14952	Soybean	cytosol	31.95	49.61
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	60.26	41.18
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	60.1	41.06

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	EntrezGene:100777010	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2
EMBL:ACUP02001269	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	EnsemblPlantsGene:GLYMA_02G257100	GO:GO:0003674
GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	UniProt:I1JI89
InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	EnsemblPlants:KRH73189
ProteinID:KRH73189	ProteinID:KRH73189.1	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam
InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007
PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF101	MetaCyc:PWY-6351	MetaCyc:PWY-6367	MetaCyc:PWY-7039
SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695
UniParc:UPI000296F4B4	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:44362819..44367742

Molecular Weight (calculated)

68723.4 Da

IEP (calculated)

6.915

GRAVY (calculated)

-0.559

Length

604 amino acids

Sequence
(BLAST)

001: MGTVTYSYKM FKYFNRKFDV SEQAPPPDVK EAFSAFSHGA ASSMSAHQLL RFLHDHQRET DCTAEDSNRI LDSIIQSRKQ TNDTNSERHH HPDNNKNGLT
101: LDEFFRFLFL LDFNDPLKSQ VHHDMNAPLS HYFIYTGHNS YLTGNQLSSV CSDVPIIKAL QRGVRVIELD LWPNSTKDDI DVVHGRTLTA PVSLIQCLKS
201: IKEYAFVKSN YPVIITLEDH LTPFLQARVA EMIAQVFGDM LYFPHEDPLT EFPSPESLKG RILISTKPPK EYLESKQFKD SDSERESNEE GSLSPCIIPE
301: LEVVDEKSNG NDLDEEGLSA RDKKSDQQSA PEYKRLITIN AGKPKGHVKD HLNNVGGVKR LSLSEHELEK ASATYGSDIV RFTQKNIIRV YPKGTRVTSS
401: NYRPHIGWMY GAQMVAFNMQ GHGKSLWYMQ GMFRANGGCG YVKKPAFLTE KGPHNEVVDP KRALPEKKSL KVKVYMGNGW SSDFSKTHFD TFSPPDFYTK
501: VCIVGVPADK ANKKTKVIQD NWFPVWDEEF EFPLTVPELA LLRIEVREYD KHEKDDFGGQ TCLPVSELRS GFRAVPLFDQ KGEQLKSVKL LMRFQFVDSV
601: PTSQ

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.