Factsheet for Bra017030.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07057	Canola	cytosol	98.16	96.07
CDY61706	Canola	cytosol	96.65	94.59
CDY69947	Canola	cytosol	31.32	89.47
Bra000168.1-P	Field mustard	cytosol	89.45	88.12
AT2G40116.1	Thale cress	cytosol	90.45	88.09
Bra004987.1-P	Field mustard	cytosol	87.6	85.88
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	62.98	63.62
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	62.81	63.24
KRG97734	Soybean	cytosol	58.96	63.2
VIT_13s0067g00890.t01	Wine grape	cytosol	62.31	62.84
KRH14947	Soybean	cytosol, mitochondrion	59.97	60.07
KRH73189	Soybean	cytosol	59.63	58.94
Bra040049.1-P	Field mustard	cytosol	52.43	57.75
Bra029697.1-P	Field mustard	mitochondrion	53.94	57.09
KRH31146	Soybean	nucleus	58.29	57.05
Bra007201.1-P	Field mustard	mitochondrion	51.76	56.59
Bra002625.1-P	Field mustard	mitochondrion	54.94	55.69
Bra032722.1-P	Field mustard	mitochondrion	52.43	55.59
Bra020359.1-P	Field mustard	cytosol, mitochondrion	54.1	54.38
KRH14948	Soybean	cytosol	53.94	53.4
KRH73188	Soybean	cytosol	52.6	52.86
Bra002626.1-P	Field mustard	cytosol	50.75	52.24
KRH31144	Soybean	cytosol	49.58	50.77
Bra002627.1-P	Field mustard	cytosol	43.22	48.41
KRG97735	Soybean	cytosol	50.42	48.39
Bra020361.1-P	Field mustard	cytosol	41.04	46.4
Bra033567.1-P	Field mustard	cytosol	40.2	45.28
Bra006749.1-P	Field mustard	cytosol, mitochondrion	43.89	42.88
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	61.14	41.29
KRH14952	Soybean	cytosol	26.8	41.13
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	60.8	41.06
Bra005237.1-P	Field mustard	cytosol	10.22	40.94
Bra039499.1-P	Field mustard	cytosol	11.39	22.9

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	EnsemblPlantsGene:Bra017030
EnsemblPlants:Bra017030.1	EnsemblPlants:Bra017030.1-P	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	GO:GO:0003674
GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008
InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	UniProt:M4DKK0	PFAM:PF00168
PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y
PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF101
SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695
UniParc:UPI0002544D7B	SEG:seg	:	:	:	:

Description

AT2G40116 (E=2e-270) | phosphoinositide-specific phospholipase C family protein

Coordinates

chrA04:+:17020967..17023515

Molecular Weight (calculated)

68413.6 Da

IEP (calculated)

6.796

GRAVY (calculated)

-0.556

Length

597 amino acids

Sequence
(BLAST)

001: MGKEKKTESH SNGSYNYKMF KCFNRKFKIN EVQPTNDVRD AFCKFSVGSG GESDGDRSSG VMGAEQLCSF LDDHQVHSVT TVAEAQRLID EVIRRRHHVT
101: RFTRHGLDLD DFFNFLFYDD LNPPIKSHVH QDMTLPLSHY FIYTGHNSYL TGNQLSSDCS EVPVIKALQR GVRVIELDLW PNSTGTDINV LHGRTLTTPV
201: PLIKCLKSIR DYAFSSSPYP VIITLEDHLT ADLQAKVAEM ATKIFGQMLY YPESDSLEEF PSPASLLHRI IISTKPPKEY LESRNPLVKQ KDNSNVSPSS
301: EEETPEKEEI QTLESMLSYD DYETKSDSDQ QEEEEEASEE QKPVYKRLIT IHAGKPKGSV KEEMKVAVDK VRRLSLSEQE LDRTCSSNSQ DVVRFTQKNL
401: LRIYPKGTRI NSSNYKPLIG WTHGAQMIAF NMQGYGKSLW MMHGMFRANG GCGYVKKPNF LMKKGFHEEV FDPRKKLPVK ETLKAITLIS THIPPDFYTK
501: MFIVGVPADN AKRKTKIIED NWYPIWDEEF SFPLTVPELA LLRIEVREYD MSEKDDFGGQ TCLPVSELRP GIRSVPLYDK KGEKMKSVRL LMRFIFE

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.