CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31144	Soybean	cytosol	86.82	92.62
KRG97734	Soybean	cytosol	54.18	60.5
KRH14948	Soybean	cytosol	57.07	58.87
KRH14947	Soybean	cytosol, mitochondrion	55.31	57.72
CDY69947	Canola	cytosol	19.29	57.42
KRH73188	Soybean	cytosol	53.86	56.4
KRH73189	Soybean	cytosol	54.66	56.29
KRH31146	Soybean	nucleus	54.02	55.08
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	51.77	54.48
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	51.61	54.13
VIT_13s0067g00890.t01	Wine grape	cytosol	50.96	53.55
CDX74806	Canola	cytosol	50.0	51.83
CDY07623	Canola	cytosol	49.52	51.76
CDY60344	Canola	cytosol	49.84	51.67
Bra004987.1-P	Field mustard	cytosol	50.48	51.56
AT2G40116.1	Thale cress	cytosol	50.8	51.55
CDY20520	Canola	cytosol	50.16	51.32
CDY61706	Canola	cytosol	50.32	51.31
CDY07057	Canola	cytosol	50.32	51.31
Bra000168.1-P	Field mustard	cytosol	49.84	51.16
KRH73190	Soybean	endoplasmic reticulum	48.87	50.67
KRH14945	Soybean	mitochondrion	48.71	50.5
Bra017030.1-P	Field mustard	cytosol	48.39	50.42
KRH14952	Soybean	cytosol	31.35	50.13
KRH31148	Soybean	mitochondrion	47.43	49.83
KRG97732	Soybean	mitochondrion	47.43	49.83
KRH72676	Soybean	cytosol, mitochondrion	29.9	49.47
KRH17039	Soybean	cytosol, mitochondrion	43.89	47.4
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	50.32	35.41
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	50.32	35.41

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	EntrezGene:100788788	Gene3D:2.60.40.150	MapMan:5.7.2.3.2	EMBL:ACUP02010812
InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlantsGene:GLYMA_18G027300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435
GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	UniProt:I1MZ23	InterPro:IPR000008	InterPro:IPR000909
InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	EnsemblPlants:KRG97735	ProteinID:KRG97735	ProteinID:KRG97735.1
PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom
InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336
PANTHER:PTHR10336:SF101	MetaCyc:PWY-6351	MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00148	SMART:SM00149
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI0002949B81	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:-:2049280..2053959

Molecular Weight (calculated)

70942.9 Da

IEP (calculated)

9.616

GRAVY (calculated)

-0.673

Length

622 amino acids

Sequence
(BLAST)

001: MKTEKNSGSA SKGKVRKKME TCIIKVLNFS TKKGDVYKAE PPLDLKEAFS KFARGENQMK KDQLLRFMVE HQGENISTIE DLDKIVEKFL QLGSSCSSTK
101: TSSTRIVDVY RKQGLSLNDF IDFLLLGDFN GPLKDEVHHD MDAPLSHYFM YTGHNSYLTG NQLTSESSDE PIIEALKQGV RVIELDLWPS KSSNNDGIKV
201: VHGRTFTTSV PVSKCLQSIK DYAFHKSDYP VILTLEDHLT PKHHDKFAKM ATEIFGETLY FPETDHLTEF PSPESLKKRI IISTKPPKEC RQSAIISKPV
301: PNGREPSEEE SRGLELPSSV AKLKTEDRNS SDEDQEDVNT SDNKPNQQDA RQYKHLIAIH GGKSKGSMKN RLKDDIKVRR LSLSEKKLKS ASESHGADLI
401: RFTQRNILRV FPKGERVQSS NFRPYLGWLY GVQMVAFNMQ GHGKSLRLMR GMFKANGGCG YVKKPEFLIR TLPHEEVFDP KKPPSVKQIL KVKVYKGDGW
501: SLDFSPTDFD RFSPPDFYTE VSIVGVPADC DKNKTRVKTD TWYPVWDEEF EFKLRVPELA LLRIEVKDKD KGKKDDFAGQ TCLPISELRN GFRSVPLYDR
601: KGKKYKSVTL LMRFKLETLN KL

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.