CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
plasma membrane 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14948	Soybean	cytosol	91.25	89.88
KRH14952	Soybean	cytosol	45.29	69.15
KRG97734	Soybean	cytosol	57.91	61.76
KRH14947	Soybean	cytosol, mitochondrion	59.43	59.23
KRH73189	Soybean	cytosol	59.09	58.11
KRH31144	Soybean	cytosol	56.23	57.29
KRH31146	Soybean	nucleus	57.91	56.39
VIT_13s0067g00890.t01	Wine grape	cytosol	55.39	55.57
CDY69947	Canola	cytosol	19.53	55.5
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	54.04	54.31
CDY60344	Canola	cytosol	54.55	54.0
KRG97735	Soybean	cytosol	56.4	53.86
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	53.7	53.79
CDY07623	Canola	cytosol	53.87	53.78
CDX74806	Canola	cytosol	54.04	53.5
Bra000168.1-P	Field mustard	cytosol	54.55	53.47
AT2G40116.1	Thale cress	cytosol	55.05	53.34
CDY20520	Canola	cytosol	54.55	53.29
CDY61706	Canola	cytosol	54.71	53.28
CDY07057	Canola	cytosol	54.71	53.28
Bra004987.1-P	Field mustard	cytosol	54.55	53.2
Bra017030.1-P	Field mustard	cytosol	52.86	52.6
KRG97732	Soybean	mitochondrion	48.99	49.16
KRH14945	Soybean	mitochondrion	49.49	49.0
KRH73190	Soybean	endoplasmic reticulum	49.33	48.83
KRH31148	Soybean	mitochondrion	48.65	48.82
KRH72676	Soybean	cytosol, mitochondrion	30.64	48.4
KRH17039	Soybean	cytosol, mitochondrion	44.78	46.18
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	52.69	35.41
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	52.19	35.07

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	EntrezGene:100776483	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2
EMBL:ACUP02001269	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	EnsemblPlantsGene:GLYMA_02G257000
GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556
UniProt:I1JI88	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892
EnsemblPlants:KRH73188	ProteinID:KRH73188	ProteinID:KRH73188.1	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388
InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	ScanProsite:PS00018
PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF101	MetaCyc:PWY-6351
MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473
SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI0002337A40	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:44355260..44359260

Molecular Weight (calculated)

68104.4 Da

IEP (calculated)

6.938

GRAVY (calculated)

-0.546

Length

594 amino acids

Sequence
(BLAST)

001: MGNNIATYNK YKSLLFFIRK YKFTELLLRA TELLPPQDLK EAFSKFTGGG SYMSAEQLHG FLMEHQGQVR KTCQETVNKV DQNREHEITL DELFRFLLHD
101: DSNAPLKAEV HHDMGAPLSH YFIYTGHNSY LTGNQLSSDC SEEPIIKALK RGVRVIELDL WPTYNKHDIK VDHGWTLANP ASVIICLESI KEYGFVASQY
201: PVIITIEDHL TTDLRAKFAE MATQIFGEML FYPGADCSCL TEFPSPESLK NRVIISTKPP KERFKSYRIK DNPMLNESES SEEESWENES PDSNKNEVET
301: EDMNGSDHDE GNESACECAR KPYQVCSPDY KHIITIHNTK LKGCLKDKLK TDGEVRRLSW SEKTLEKASE SHGTDILRFT QKNILRVYPS AMRVKSSNFK
401: PNIGWMYGAQ MVACNMQGLG KSLWLMQGMF RANGGCGYVK KPQFLMQKYH CDNEFDPTRI QSVKKKTFKV KVYMGHGWSS DLSPTHFDKC SPPDFYTKVC
501: IVGMPDDVAK KKTKVMMDNW FPVWDEEFEF SLIVPELALL LIQVKDKDPG KDDFAGQTCL PVSELKHGFH SVPLYNKKGE KFKSVKPLMQ FQFE

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.