Factsheet for VIT_13s0067g00890.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69947	Canola	cytosol	23.82	67.46
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	65.71	66.16
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	65.54	65.65
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	65.71	65.6
VIT_06s0004g06650.t01	Wine grape	cytosol	53.72	65.03
KRG97734	Soybean	cytosol	61.15	64.99
CDY07057	Canola	cytosol	65.2	63.28
CDY61706	Canola	cytosol	64.86	62.95
CDY07623	Canola	cytosol	63.18	62.86
CDY60344	Canola	cytosol	63.68	62.83
VIT_13s0067g00900.t01	Wine grape	mitochondrion	62.67	62.56
Bra017030.1-P	Field mustard	cytosol	62.84	62.31
Bra000168.1-P	Field mustard	cytosol	63.68	62.21
AT2G40116.1	Thale cress	cytosol	63.68	61.5
CDX74806	Canola	cytosol	61.99	61.17
Bra004987.1-P	Field mustard	cytosol	62.5	60.76
KRH14947	Soybean	cytosol, mitochondrion	61.15	60.74
CDY20520	Canola	cytosol	62.33	60.69
VIT_08s0105g00300.t01	Wine grape	cytosol	56.42	60.62
KRH73189	Soybean	cytosol	61.49	60.26
KRH31146	Soybean	nucleus	61.66	59.84
VIT_08s0007g02280.t01	Wine grape	cytosol, mitochondrion	60.3	57.49
KRH14948	Soybean	cytosol	57.26	56.22
KRH73188	Soybean	cytosol	55.57	55.39
VIT_06s0004g06670.t01	Wine grape	cytosol	52.2	53.18
KRH31144	Soybean	cytosol	52.2	53.0
KRG97735	Soybean	cytosol	53.55	50.96
KRH14952	Soybean	cytosol	31.08	47.3
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	63.34	42.42
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	62.84	42.08

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	EntrezGene:100248420	wikigene:100248420	Gene3D:2.60.40.150
Gene3D:3.20.20.190	MapMan:5.7.2.3.2	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:CBI25478	ProteinID:CBI25478.3
ncoils:Coil	UniProt:D7T4P6	InterPro:EF-hand-dom_pair	EMBL:FN595514	GO:GO:0003674	GO:GO:0003824
GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629
GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909
InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	EntrezGene:LOC100248420	wikigene:LOC100248420	PFAM:PF00168
PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y
PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF101
SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695
UniParc:UPI00015CA301	ArrayExpress:VIT_13s0067g00890	EnsemblPlantsGene:VIT_13s0067g00890	EnsemblPlants:VIT_13s0067g00890.t01	RefSeq:XP_002271986	RefSeq:XP_002271986.2
RefSeq:XP_010658272.1	SEG:seg	:	:	:	:

Description

Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:D7T4P6]

Coordinates

chr13:+:501561..504877

Molecular Weight (calculated)

67076.6 Da

IEP (calculated)

8.322

GRAVY (calculated)

-0.422

Length

592 amino acids

Sequence
(BLAST)

001: MKTHNYKVFK CFSRKFKIGG VEPPPYVKLI FAKYSGGGTH MGPAQFRRFL AEVQGQEGCT VADAERVMEE VARRRHNHIG LTEHQSCALT LDDFFHYLLS
101: DDLNQAIKTQ VHHDMTAPLP HYFIYTGHNS YLTGNQISSD CSDVPIIKAL LTGVRVIELD IWPNSTKDDI QVIHGRTLTT PVTLIKCLRS IREYAFIASP
201: YPVIITLEDH LTPDLQAKVA EMVTQTFGDM LYYPESGCLE EFPSPESLKY KIIISTKPPK EDVEAKRIKG KENSSPRERD ICEESSQKEV SDLLAELEAA
301: ERESESYEYE ENSTSDGRSG QSETPKYKLL ITIQAGKPKG GLKNALRVGS NKIRRLSLSE QALEKAAASH GTDLVRFTQK NVLRIYPKGT RVNSSNYKPM
401: LGWMHGAQMV AFNMQGYGKS LWLMHGMFRC NGGCGYIKKP DFLMKKGPCR EVFNPKATLP VKTILKVGVY MGDGWSLDFS PTHFDTYSPP DFYTKIHIVG
501: VPADNTKRKT KIINNNWFPV WDEAFIFSLT VPELALLRIE VREHDRSEKD DFGGQTCLPV SELRPGIRSV PLFDKKGEKY KSVRLLMEFE FL

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.