Factsheet for TraesCS2A01G084000.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G098500.1	Wheat	cytosol, mitochondrion	97.04	97.52
TraesCS2D01G082000.1	Wheat	cytosol, mitochondrion	96.88	97.2
HORVU2Hr1G013730.2	Barley	cytosol	82.92	90.34
EER99967	Sorghum	cytosol, mitochondrion	79.97	80.23
Os07t0694000-01	Rice	plasma membrane	76.19	77.59
Zm00001d007229_P001	Maize	cytosol, mitochondrion	76.19	76.57
GSMUA_Achr5P28270_001	Banana	plasma membrane	65.85	67.51
GSMUA_Achr2P18980_001	Banana	mitochondrion	64.86	67.41
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	65.35	67.12
TraesCS4A01G109000.2	Wheat	cytosol	69.29	66.67
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	61.41	63.61
Solyc06g007120.2.1	Tomato	nucleus	60.26	62.52
VIT_06s0004g06650.t01	Wine grape	cytosol	49.75	61.96
CDY71544	Canola	cytosol	49.1	61.4
CDY52122	Canola	cytosol, mitochondrion	56.49	58.4
Bra002625.1-P	Field mustard	mitochondrion	56.49	58.4
CDX80341	Canola	mitochondrion	55.99	57.8
CDY32691	Canola	cytosol	55.99	57.41
Bra020359.1-P	Field mustard	cytosol, mitochondrion	55.99	57.41
AT5G58700.3	Thale cress	cytosol	55.99	57.12
TraesCS1A01G069300.1	Wheat	mitochondrion	51.89	54.02
AT5G58690.1	Thale cress	cytosol	50.41	53.11
Bra005237.1-P	Field mustard	cytosol	12.97	53.02
OQU82766	Sorghum	cytosol	57.96	51.99
Bra002626.1-P	Field mustard	cytosol	48.93	51.38
CDY52121	Canola	cytosol	49.1	50.76
CDX80342	Canola	cytosol	49.1	50.76
CDX75008	Canola	cytosol	13.79	48.55
CDY33201	Canola	cytosol	9.52	45.31
AT3G47220.1	Thale cress	cytosol	33.83	38.79
AT3G47290.2	Thale cress	cytosol	35.96	38.22

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892
PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PI-PLC_plant	InterPro:PLC-like_Pdiesterase_TIM-brl
InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008
PANTHER:PTHR10336	PANTHER:PTHR10336:SF109	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF49562
SUPFAM:SSF51695	EnsemblPlantsGene:TraesCS2A01G084000	EnsemblPlants:TraesCS2A01G084000.2	TIGR:cd00275	SEG:seg	:

Description

No Description!

Coordinates

chr2A:-:38535098..38538338

Molecular Weight (calculated)

68504.2 Da

IEP (calculated)

6.283

GRAVY (calculated)

-0.581

Length

609 amino acids

Sequence
(BLAST)

001: MGTYKCCLIF KRRFRWTDAP PPDDVRALFA EHSGGAATMG ADGLRRYLES SAGGDPDAAD ADAEDEADRL LDQIRLQGHQ QRAGPRLPRL GRGQLLGLDD
101: FHRFLFSADL NPPVRRPRVH HDMSQALSHY YVYTGHNSYL TGNQLSSDCS DVPIIKALQR GVRVIELDMW PNSAKDDISI LHGRTLTTPV SLLKCLKSIK
201: EYAFVASPYP VIITLEDHLT PELQEKVAKM VLEVFGTILY YPEEEHPKEL PSPESLKGRV LLSTKPPKEY LEAKDGGAAK DGDAEQNPGK GTDDDAAWGT
301: EVPDFKTEIQ SAKQEDDASE NRRDDDDDDD DEDEQKMQQH LAPQYKHLIT IRAGKPKGGT TSDALKCDPN KVRRLSLSEQ QLAKAVVNHG TEIVRFTQRN
401: LLRIYPKGTR VTSSNYNPFI GWVHGAQMVA FNMQGYGRAL WLMHGFYKAN GGCGYVKKPD FLMQSEPEVF DPKKPQPVKK TLKVKVYMGD GWRMDFKQTH
501: FDQYSPPDFY ARVGIAGVPA DSVMRKTKAV EDNWVPVWGE EFSFGLTVPE LALLRVEAHE YDMSEKDDFA GQTVLPVSEL QPGIRAVALF DRKGNKFPNV
601: KLLMRFEFV

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.