Factsheet for TraesCS2B01G098500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G084000.2	Wheat	cytosol, mitochondrion	97.52	97.04
TraesCS2D01G082000.1	Wheat	cytosol, mitochondrion	96.53	96.38
HORVU2Hr1G013730.2	Barley	cytosol	83.17	90.16
EER99967	Sorghum	cytosol, mitochondrion	80.03	79.9
Os07t0694000-01	Rice	plasma membrane	76.57	77.59
Zm00001d007229_P001	Maize	cytosol, mitochondrion	76.4	76.4
GSMUA_Achr5P28270_001	Banana	plasma membrane	66.34	67.68
GSMUA_Achr2P18980_001	Banana	mitochondrion	65.18	67.41
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	65.84	67.28
TraesCS4B01G195200.2	Wheat	cytosol	68.65	65.72
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	61.72	63.61
Solyc06g007120.2.1	Tomato	nucleus	60.89	62.86
VIT_06s0004g06650.t01	Wine grape	cytosol	50.33	62.37
CDY71544	Canola	cytosol	49.84	62.01
CDY52122	Canola	cytosol, mitochondrion	56.77	58.4
Bra002625.1-P	Field mustard	mitochondrion	56.77	58.4
CDX80341	Canola	mitochondrion	56.27	57.8
CDY32691	Canola	cytosol	56.6	57.74
Bra020359.1-P	Field mustard	cytosol, mitochondrion	56.44	57.58
AT5G58700.3	Thale cress	cytosol	56.27	57.12
AT5G58690.1	Thale cress	cytosol	51.32	53.81
Bra005237.1-P	Field mustard	cytosol	13.04	53.02
Bra002626.1-P	Field mustard	cytosol	49.84	52.07
OQU82766	Sorghum	cytosol	58.25	51.99
CDY52121	Canola	cytosol	50.0	51.44
CDX80342	Canola	cytosol	50.0	51.44
CDX75008	Canola	cytosol	14.03	49.13
CDY33201	Canola	cytosol	9.57	45.31
AT3G47220.1	Thale cress	cytosol	34.16	38.98
AT3G47290.2	Thale cress	cytosol	36.47	38.57

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892
PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PI-PLC_plant	InterPro:PLC-like_Pdiesterase_TIM-brl
InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008
PANTHER:PTHR10336	PANTHER:PTHR10336:SF109	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF49562
SUPFAM:SSF51695	EnsemblPlantsGene:TraesCS2B01G098500	EnsemblPlants:TraesCS2B01G098500.1	TIGR:cd00275	SEG:seg	:

Description

No Description!

Coordinates

chr2B:+:58321448..58324897

Molecular Weight (calculated)

68226.0 Da

IEP (calculated)

6.472

GRAVY (calculated)

-0.590

Length

606 amino acids

Sequence
(BLAST)

001: MGTYKCCLVF KRRYRWTDAP PPDDVRALFA VHSGGAATMG ADGLRRYLES SDPDAADDAE GEADRLLDQI RLQGHQHQRA GPRLPRLGRG QLLGLDDFHR
101: FLFSADLNPP VRRPQVHHDM SQPLSHYYVY TGHNSYLTGN QLSSDCSDVP IIKALQRGVR VIELDMWPNS AKDDISILHG RTLTTPVSLL KCLKSIKEYA
201: FAASPYPVII TLEDHLTPEL QDKVAKMVLE VFGTILYYPE EEHPKELPSP ESLKGRVLLS TKPPKEYLEA KDGGAAKDGD AEQNPGKGTD DDAAWGTEVP
301: DFKTEIQSAK QEDDASENRR DGDEDDDDED EQKMQQHLAP QYKRLITIRA GKPKGGTTSD ALKCDPNKVR RLSLSEQQLA KAVVNHGTEI VRFTQRNLLR
401: IYPKGTRVTS SNYNPFIGWV HGAQMVAFNM QGYGRALWLM HGFYKANGGC GYVKKPDFLM QSEPEVFDPK KPQPVKKTLK VKVYMGDGWR MDFKQTHFDQ
501: YSPPDFYARV GIAGVPADSV MKKTKAVEDN WVPVWGEEFS FDLTVPELAL LRVEAHEYDM SEKDDFAGQT VLPVSELQPG IRAVALFDRK GNKLPNVKLL
601: MRFEFV

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.