Factsheet for PGSC0003DMT400049368

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g076710.1.1	Tomato	cytosol	95.97	95.17
VIT_08s0007g02280.t01	Wine grape	cytosol, mitochondrion	68.29	65.54
PGSC0003DMT400069760	Potato	mitochondrion	63.93	65.13
PGSC0003DMT400016945	Potato	endoplasmic reticulum	53.02	63.97
VIT_08s0105g00300.t01	Wine grape	cytosol	58.22	62.98
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	57.55	58.04
GSMUA_Achr10P...	Banana	mitochondrion	49.66	57.36
PGSC0003DMT400078046	Potato	cytosol	40.1	54.07
HORVU1Hr1G014570.19	Barley	mitochondrion	52.68	53.86
TraesCS1A01G069300.1	Wheat	mitochondrion	52.85	53.85
TraesCS1D01G071800.3	Wheat	mitochondrion	53.19	53.55
Os05t0127200-01	Rice	plasma membrane	51.51	51.34
HORVU1Hr1G014580.9	Barley	mitochondrion	52.52	51.31
OQU77319	Sorghum	mitochondrion	51.68	51.16
Zm00001d047447_P002	Maize	extracellular	49.66	44.51
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	56.71	38.24

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2
InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:CAA63777	ProteinID:CAA63777.1	InterPro:EF-hand-dom_pair	GO:GO:0003674
GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008
InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	UniProt:M1BNL7	PFAM:PF00168
PFAM:PF00387	PFAM:PF00388	PFAM:PF09279	EnsemblPlantsGene:PGSC0003DMG400019179	PGSC:PGSC0003DMG400019179	EnsemblPlants:PGSC0003DMT400049368
InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390
PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF92	SMART:SM00148
SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI000296F223
EMBL:X93564	SEG:seg	:	:	:	:

Description

1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase [Source:PGSC_GENE;Acc:PGSC0003DMG400019179]

Coordinates

chr10:-:50214414..50218308

Molecular Weight (calculated)

67752.2 Da

IEP (calculated)

6.398

GRAVY (calculated)

-0.437

Length

596 amino acids

Sequence
(BLAST)

001: MSKQTYRICC FQRKFKLKEA EAPDEIKDLF ERFSENGIMT AEHLCKFLKD VQGEENVTKE EAETVMESAL KLVHEHLNIV FHRKGLNLEG FFRYLFSDLN
101: VSISTDKKVH HDMTAPLSHY FIYTSHNTYL TGNQLNSDCS DVPIIKALQQ GVRVIELDMW PNSSKDNVDI LHGGTLTPPV ELIQCLKSIK EHAFVASEYP
201: VIITLEDHLT PDLQAKAAEM VTQVFGDILF TCGAECLSEF PSPESLKGRI IISTKPPKEY LESKKPSEKD DGSQKGKKSS EEKAWGAEIS DLSQKMIAYS
301: ENKDNGECQD DEADSHHENP NIQQNIAPEY KHLIAIQAGK SKGPTSEWLT VDPIKVKRIS LNEEKLINVA LNHGKDLIRF TQRNLLRVYP KGMRVDSSNY
401: NPLMGWMHGA QMVAFNMQGH GRPFWLMQGM FRANGGCGYV KKPELLLKTD ANNEVHDPKR LLSVKTTLKV KVYMGKGWHL DFKRTHFDAY SPPDFYVKIG
501: IAGVAADSTV KKTKAIEDNW IPIWNDEFEF PLTVPELALL RVEVHEYDMS EIDDFGGQTC IPVSELRTGI RAVPIYNEKG EKYPSVKLLM RFEFVI

Best Arabidopsis Sequence Match ( AT3G08510.1 )
(BLAST)

001: MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PGDTVMKKTK
501: TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V

Arabidopsis Description

PLC2Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A178VDK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.