Factsheet for PGSC0003DMT400035698

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039817	Potato	plastid	82.72	64.11
PGSC0003DMT400034331	Potato	plasma membrane	62.14	62.27
VIT_19s0014g00750.t01	Wine grape	plasma membrane	50.0	51.05
PGSC0003DMT400073675	Potato	plasma membrane	83.33	43.83
VIT_19s0014g00790.t01	Wine grape	cytosol, nucleus, plasma membrane	68.31	37.73
VIT_19s0014g00680.t01	Wine grape	plasma membrane	71.6	34.08
KRH26159	Soybean	plasma membrane	68.93	33.14
KRH55049	Soybean	endoplasmic reticulum	68.93	33.1
PGSC0003DMT400073238	Potato	cytosol, nucleus, plasma membrane	51.65	32.51
VIT_19s0014g00810.t01	Wine grape	plasma membrane, plastid	67.28	32.06
KRH21908	Soybean	plasma membrane	67.08	31.87
KRH27392	Soybean	plasma membrane	65.64	31.71
KRH27378	Soybean	plasma membrane	65.64	31.68
GSMUA_Achr6P25940_001	Banana	plasma membrane	62.76	31.25
Bra038124.1-P	Field mustard	plasma membrane	65.43	31.21
AT1G53430.1	Thale cress	plasma membrane	66.26	31.02
AT1G53440.1	Thale cress	plasma membrane	65.84	30.92
CDY60204	Canola	plasma membrane	65.84	30.65
CDY25853	Canola	plasma membrane	65.43	30.46
Zm00001d016242_P002	Maize	plasma membrane	53.7	29.66
GSMUA_Achr1P04980_001	Banana	plasma membrane	59.47	28.73
PGSC0003DMT400044535	Potato	plasma membrane	59.47	28.14
KXG29872	Sorghum	plasma membrane	56.58	26.7
VIT_19s0014g00830.t01	Wine grape	plasma membrane	71.19	21.12
Os02t0232500-01	Rice	extracellular, plasma membrane	30.86	20.86

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1B2P2
InterPro:Malectin	PFAM:PF00069	PFAM:PF11721	EnsemblPlantsGene:PGSC0003DMG401013731	PGSC:PGSC0003DMG401013731	EnsemblPlants:PGSC0003DMT400035698
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF101	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00029509AD	SEG:seg	:

Description

Kinase [Source:PGSC_GENE;Acc:PGSC0003DMG401013731]

Coordinates

chr12:-:7030526..7034409

Molecular Weight (calculated)

53795.6 Da

IEP (calculated)

8.244

GRAVY (calculated)

-0.039

Length

486 amino acids

Sequence
(BLAST)

001: MSGSFTTEPT LGVAACGLFK YKSITLELRD NFTTLTHVTF FMSIADHSLF INCGGGRITY EGNDYEEDLT TRGPSYFFSS PDRWAFSSSG VYVGLANVSY
101: IATNRFLLNI SGADFYNTAR LAPNSLKYYG LCLRGGSYRV RLHFAEIMFS NDSTYSSLGR RIFDVAIQGR VVLKDFNIME EANGVGEVII KDFDDITVSS
201: TLEIHLYWTG KGTNAIPDRG VYGPLISAIS VTPNFKIGRR LPVGAVIGIV LASIVVVLIV LFSLWKKGIF GGKINQEELE LRALDLQTGH FRLRQIKAAT
301: NNFDPANKIG EGGFGPVYKG VLSDGAVIAV KQLSSKSKQG NREFVNEIGM ISALQHPNLV KLYGCCIEGN QLLVIYEYME NNCLARALFG RDDQRLNLDW
401: ATRKRICSGI AKGLAYLHEE SRLKIVHRDI KSTNVLLDKD LNAKISDFGL AKLDEEENTH ISTRIAGTVG YMAPEYATRG YLTDKS

Best Arabidopsis Sequence Match ( AT1G07650.1 )
(BLAST)

0001: MIYLHRIYFI IVLFTLIFHG RLGFSDNNKL HEAEVRALKE IGKKLGKKDW DFNKDPCSGE GTWIVTTYTT KGFESNITCD CSFLPQNSSC HVIRIALKSQ
0101: NLTGIVPPEF SKLRHLKVLD LSRNSLTGSI PKEWASMRLE DLSFMGNRLS GPFPKVLTRL TMLRNLSLEG NQFSGPIPPD IGQLVHLEKL HLPSNAFTGP
0201: LTEKLGLLKN LTDMRISDNN FTGPIPDFIS NWTRILKLQM HGCGLDGPIP SSISSLTSLT DLRISDLGGK PSSFPPLKNL ESIKTLILRK CKIIGPIPKY
0301: IGDLKKLKTL DLSFNLLSGE IPSSFENMKK ADFIYLTGNK LTGGVPNYFV ERNKNVDVSF NNFTDESSIP SHDCNRVTSN LVESFALGNK SHKGSTCFLQ
0401: RMPCVHPKRY HLYKLYINCG GGEVKVDKEI TYQADDEPKG ASMYVLGANK RWALSSTGNF MDNDDDADEY TVQNTSRLSV NASSPSFGLY RTARVSPLSL
0501: TYYGICLGNG NYTVNLHFAE IIFTDDNTLY SLGKRLFDIY VQDQLVIKNF NIQEAARGSG KPIIKSFLVN VTDHTLKIGL RWAGKGTTGI PIRGVYGPMI
0601: SAISVEPNFK PPVYYDTKDI ILKVGVPVAA ATLLLFIIVG VFWKKRRDKN DIDKELRGLD LQTGTFTLRQ IKAATDNFDV TRKIGEGGFG SVYKGELSEG
0701: KLIAVKQLSA KSRQGNREFV NEIGMISALQ HPNLVKLYGC CVEGNQLILV YEYLENNCLS RALFGKDESS RLKLDWSTRK KIFLGIAKGL TFLHEESRIK
0801: IVHRDIKASN VLLDKDLNAK ISDFGLAKLN DDGNTHISTR IAGTIGYMAP EYAMRGYLTE KADVYSFGVV ALEIVSGKSN TNFRPTEDFV YLLDWAYVLQ
0901: ERGSLLELVD PTLASDYSEE EAMLMLNVAL MCTNASPTLR PTMSQVVSLI EGKTAMQELL SDPSFSTVNP KLKALRNHFW QNELSRSLSF STSGPRTASA
1001: NSLVDAEEKT GLLD

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.