CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26159	Soybean	plasma membrane	92.98	93.08
KRH27392	Soybean	plasma membrane	72.63	73.06
KRH27378	Soybean	plasma membrane	72.53	72.89
KRH21908	Soybean	plasma membrane	73.52	72.73
PGSC0003DMT400034331	Potato	plasma membrane	34.78	72.58
VIT_19s0014g00750.t01	Wine grape	plasma membrane	33.79	71.85
PGSC0003DMT400039817	Potato	plastid	43.97	70.97
PGSC0003DMT400035698	Potato	cytosol, endoplasmic reticulum, plasma membrane	33.1	68.93
VIT_19s0014g00680.t01	Wine grape	plasma membrane	68.18	67.58
VIT_19s0014g00790.t01	Wine grape	cytosol, nucleus, plasma membrane	58.1	66.82
PGSC0003DMT400073675	Potato	plasma membrane	59.68	65.37
Solyc12g014350.1.1	Tomato	endoplasmic reticulum, extracellular	63.74	63.36
AT1G53430.1	Thale cress	plasma membrane	62.06	60.5
VIT_19s0014g00810.t01	Wine grape	plasma membrane, plastid	60.77	60.29
Bra038124.1-P	Field mustard	plasma membrane	59.68	59.27
GSMUA_Achr6P25940_001	Banana	plasma membrane	57.02	59.12
AT1G53440.1	Thale cress	plasma membrane	59.68	58.36
CDY25853	Canola	plasma membrane	60.18	58.33
CDY60204	Canola	plasma membrane	60.18	58.33
KRH75938	Soybean	cytosol	32.61	58.2
KRH55301	Soybean	cytosol, plasma membrane, vacuole	24.7	54.95
GSMUA_Achr1P04980_001	Banana	plasma membrane	54.55	54.87
KRH21897	Soybean	cytosol, plasma membrane	38.93	54.34
KRH27395	Soybean	cytosol, plasma membrane	47.33	53.46
KRH21906	Soybean	endoplasmic reticulum	52.77	53.45
KRH75931	Soybean	cytosol	32.71	52.54
KRH14451	Soybean	plasma membrane	53.06	52.29
KRH73704	Soybean	plasma membrane	52.87	52.2
KRH27397	Soybean	plasma membrane	50.1	50.5
KXG29872	Sorghum	plasma membrane	50.79	49.9
KRH55298	Soybean	cytosol, nucleus, plasma membrane, plastid	36.56	49.87
KRH75939	Soybean	plasma membrane	48.91	49.6
Zm00001d016242_P002	Maize	plasma membrane	42.79	49.2
KRH21905	Soybean	plasma membrane	50.0	48.84
KRH59039	Soybean	plasma membrane	45.06	46.34
KRH21191	Soybean	plasma membrane	45.85	45.67
Os02t0232500-01	Rice	extracellular, plasma membrane	32.11	45.2
VIT_19s0014g00830.t01	Wine grape	plasma membrane	69.47	42.92
KRH37939	Soybean	plasma membrane	41.6	41.03
KRH44862	Soybean	plasma membrane	40.91	40.04
KRH44860	Soybean	plasma membrane	40.51	39.61
KRH75936	Soybean	extracellular	2.67	32.93

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100817368	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10
EMBL:ACUP02003834	EnsemblPlantsGene:GLYMA_06G226700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:Galactose-bd-like_sf	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR008979	InterPro:IPR032675	UniProt:K7KWQ9
EnsemblPlants:KRH55049	ProteinID:KRH55049	ProteinID:KRH55049.1	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Malectin	PFAM:PF00560	PFAM:PF07714	PFAM:PF11721	PFAM:PF13855	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF101	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF49785
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002959B9A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:32960352..32974935

Molecular Weight (calculated)

112101.0 Da

IEP (calculated)

5.443

GRAVY (calculated)

-0.152

Length

1012 amino acids

Sequence
(BLAST)

0001: MMMVRFVYAL IFGFVALNCL QVFEESNAQR LPQDEVKALQ AISDKLENVN WNVTERSCIE VGGFNGTINK NNGDIVRNVT CNCTFQNNSV CHVDKIILKD
0101: QNISGVLPSE FGNLTHLKEL DLTRNYLNGS LPTNFPPNSL VILSLLGNRL SGPIPTEIGD IASLEELVLE CNQLKGLFPP SLGNLSKLKR LLLSANNFTG
0201: TIPETYSKLK NLTEFRIDGS SLSGPIPSFI GNWTNLERLD LQGTNMEGPI PPTISQLKLL TELRITDLNG GPSMTFPDLK NLKKLKRLVL RNCLITGSIP
0301: DYIGEMANLT TLDLSFNMLT GPVPDPIQGL DNLDYLFLTN NSLSGPIQEW ILSFKKHIDL SYNNFTSSSA TTCQPLDVNL ASSHSSSAVT SASTFCLKRN
0401: LPCAEKPQYK SLFINCGGKE GEFEGNDYVG DLELDGISNF DLRNEGQWAY SSTGVYMGKA DAGFIATNTF SLNITGPDYY QNARLSPLSL NYYGLCLPKG
0501: NYKVKLHFAE IMFSNDQTFR SLGRRIFDVS VQGFRYLKDF NIMEEAGGVG KNITKEFDVD VDDGTLEIHL YWAGKGTTAI PDRGVYGPLI SAIEMIPNFE
0601: NPSKGMSTGF IVGIVAASCG LVILILILLW KMGFICKKDT TDKELLELKT GYFSLRQIKA ATNNFDPANK IGEGGFGPVY KGVLSDGDVI AVKQLSSKSK
0701: QGNREFVNEI GMISALQHPN LVKLYGCCIE GNQLLLIYEY MENNSLARAL FGEHEQKLHL YWPTRMKICV GIARGLAYLH EESRLKIVHR DIKATNVLLD
0801: KDLNAKISDF GLAKLDEEEN THISTRIAGT IGYMAPEYAM RGYLTDKADV YSFGVVALEI VSGKSNTKYR PKEEFVYLLD WAYVLQEQGN LLELVDPSLG
0901: SKYSPEEAMR MLSLALLCTN PSPTLRPTMS SVVSMLEGKI PIQAPIIRRS ESNQDVRFKA FELLSQDSQT LVSSAYSQES MKQRHKSEDG PWVDSSISLP
1001: SGDDYSSSSK LI

Best Arabidopsis Sequence Match ( AT1G53430.1 )
(BLAST)

0001: MGFIFSTEKV VYVLLLIFVC LENFGSNAQL LPEDEVQTLR TIFRKLQNQT VNIERTSCSD QNWNFVVESA SNSPTSNITC DCTFNASSVC RVTNIQLKSF
0101: SLPGIFPPEF GNLTRLREID LSRNFLNGTI PTTLSQIPLE ILSVIGNRLS GPFPPQLGDI TTLTDVNLET NLFTGPLPRN LGNLRSLKEL LLSANNFTGQ
0201: IPESLSNLKN LTEFRIDGNS LSGKIPDFIG NWTLLERLDL QGTSMEGPIP PSISNLTNLT ELRITDLRGQ AAFSFPDLRN LMKMKRLVLR NCLIRGPIPE
0301: YIGSMSELKT LDLSSNMLTG VIPDTFRNLD AFNFMFLNNN SLTGPVPQFI INSKENLDLS DNNFTQPPTL SCNQLDVNLI SSYPSVTDNS VQWCLREGLP
0401: CPEDAKQSSL FINCGGSRLK IGKDTYTDDL NSRGQSTFSS VSERWGYSSS GVWLGKEDAG YLATDRFNLI NGSTPEYYKT ARLSPQSLKY YGLCLRRGSY
0501: KLQLHFAEIM FSNDQTFNSL GRRIFDIYVQ GNLLERDFNI AERAGGVGKP FIRQIDGVQV NGSTLEIHLQ WTGKGTNVIP TRGVYGPLIS AITITPNFKV
0601: DTGKPLSNGA VAGIVIAACA VFGLLVLVIL RLTGYLGGKE VDENEELRGL DLQTGSFTLK QIKRATNNFD PENKIGEGGF GPVYKGVLAD GMTIAVKQLS
0701: SKSKQGNREF VTEIGMISAL QHPNLVKLYG CCIEGKELLL VYEYLENNSL ARALFGTEKQ RLHLDWSTRN KICIGIAKGL AYLHEESRLK IVHRDIKATN
0801: VLLDLSLNAK ISDFGLAKLN DDENTHISTR IAGTIGYMAP EYAMRGYLTD KADVYSFGVV CLEIVSGKSN TNYRPKEEFV YLLDWAYVLQ EQGSLLELVD
0901: PDLGTSFSKK EAMRMLNIAL LCTNPSPTLR PPMSSVVSML EGKIKVQPPL VKREADPSGS AAMRFKALEL LSQDSESQVS TYARNREQDI SSSSMDGPWV
1001: DSSFSEPGKD VSLQQQEEGR SSSSSRKLLD DLTDVKIE

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g53430 [Source:UniProtKB/Swiss-Prot;Acc:C0LGG8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.