Factsheet for VIT_19s0014g00810.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0014g00790.t01	Wine grape	cytosol, nucleus, plasma membrane	78.04	90.45
VIT_19s0014g00750.t01	Wine grape	plasma membrane	41.08	88.03
PGSC0003DMT400034331	Potato	plasma membrane	34.61	72.78
PGSC0003DMT400039817	Potato	plastid	43.43	70.65
VIT_19s0014g00680.t01	Wine grape	plasma membrane	70.2	70.13
PGSC0003DMT400035698	Potato	cytosol, endoplasmic reticulum, plasma membrane	32.06	67.28
PGSC0003DMT400073675	Potato	plasma membrane	57.55	63.53
KRH55049	Soybean	endoplasmic reticulum	60.29	60.77
KRH26159	Soybean	plasma membrane	60.2	60.73
Solyc12g014350.1.1	Tomato	endoplasmic reticulum, extracellular	60.59	60.71
KRH21908	Soybean	plasma membrane	59.8	59.63
KRH27378	Soybean	plasma membrane	58.53	59.28
KRH27392	Soybean	plasma membrane	58.33	59.15
AT1G53430.1	Thale cress	plasma membrane	57.84	56.84
AT1G53440.1	Thale cress	plasma membrane	57.35	56.52
Bra038124.1-P	Field mustard	plasma membrane	55.39	55.45
CDY25853	Canola	plasma membrane	56.18	54.89
GSMUA_Achr6P25940_001	Banana	plasma membrane	52.45	54.82
CDY60204	Canola	plasma membrane	56.08	54.79
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	25.2	54.56
VIT_19s0014g00530.t01	Wine grape	plasma membrane	25.49	52.74
GSMUA_Achr1P04980_001	Banana	plasma membrane	50.59	51.29
VIT_12s0028g01350.t01	Wine grape	plasma membrane	50.29	50.74
VIT_19s0014g00470.t01	Wine grape	plasma membrane	50.0	50.65
VIT_10s0003g02000.t01	Wine grape	plasma membrane	35.39	49.86
VIT_19s0014g00520.t01	Wine grape	plasma membrane	49.31	49.75
VIT_19s0014g00500.t01	Wine grape	plasma membrane	49.8	49.61
Zm00001d016242_P002	Maize	plasma membrane	41.08	47.61
VIT_10s0003g01990.t01	Wine grape	plasma membrane	42.65	47.39
VIT_00s0125g00210.t01	Wine grape	cytosol	27.35	46.73
VIT_10s0003g01920.t01	Wine grape	plasma membrane	43.24	46.52
KXG29872	Sorghum	plasma membrane	46.86	46.41
VIT_10s0003g01860.t01	Wine grape	plastid, vacuole	30.69	45.56
VIT_10s0003g01940.t01	Wine grape	plasma membrane, plastid, vacuole	34.9	45.47
VIT_10s0003g01880.t01	Wine grape	cytosol	42.65	45.22
VIT_10s0003g01980.t01	Wine grape	cytosol	41.18	41.42
VIT_19s0014g00830.t01	Wine grape	plasma membrane	66.18	41.21
VIT_10s0092g00470.t01	Wine grape	cytosol	39.61	40.73
Os02t0232500-01	Rice	extracellular, plasma membrane	27.84	39.5
VIT_12s0055g00580.t01	Wine grape	plasma membrane	39.9	39.48
VIT_00s0125g00140.t01	Wine grape	cytosol	26.96	39.45
VIT_10s0092g00710.t01	Wine grape	plasma membrane	38.63	39.28
VIT_00s0125g00090.t01	Wine grape	plasma membrane	38.33	39.1
VIT_10s0092g00590.t01	Wine grape	plasma membrane	39.22	38.17
VIT_10s0003g01900.t01	Wine grape	plasma membrane	41.37	27.93
VIT_12s0055g00590.t01	Wine grape	plasma membrane	39.61	19.19

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100250347	wikigene:100250347	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20
Gene3D:3.80.10.10	ProteinID:CCB46216	ProteinID:CCB46216.1	UniProt:F6H1V2	EMBL:FN595229	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100250347	wikigene:LOC100250347	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Malectin	PFAM:PF00560
PFAM:PF07714	PFAM:PF11721	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF101
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0002108CBC	ArrayExpress:VIT_19s0014g00810	EnsemblPlantsGene:VIT_19s0014g00810	EnsemblPlants:VIT_19s0014g00810.t01	RefSeq:XP_002283464
RefSeq:XP_002283464.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr19:+:813603..824313

Molecular Weight (calculated)

113396.0 Da

IEP (calculated)

6.383

GRAVY (calculated)

-0.221

Length

1020 amino acids

Sequence
(BLAST)

0001: MRSHERTFVW LNIQSFSSLK TSFKPLSPTH SIRCKANQPL LQSESMDSSS LLLLLLLGFF CSSEFTSHAQ LIPKDEVQTL RTIFKKLNYK YWNISQASCN
0101: RDFNRTIDDN SYSNVTCNCT FNEGTVCHVT NIQLKGLDLD GTLPDEFGDL PYLQELDLSR NYINGSIPTS LSRLSLTILA LVGNRISGSI PEVISNISTL
0201: EELVLEANQL GEHLPPSLGK LSHLRRLRID GNNLSGKIPD WIGNWTNLEK LYLQGTSMDG PIPSTISQLK NLIELLISDL SGPTTSFPNL KDMKNLKILV
0301: MRNCSITGEI PKDIGYIESL KLLDLSFNRL NGKIPESFKE EKEDRAKLNF MFLTNNSLTG EVPNWISSDT KNNMNLVSSY ASSAREMTPW LKKDLPCPRK
0401: AKYYSLYINC GGVQTTFKRK AYEKDDNVEG PSQFFTDSID KWAYSSTGVF IGDEDGSHLA KNTSALNSED AEIYQTARLA PISLKYYGLC LRKGIYRLRL
0501: YFAEIMFSND QTFGSLGKRL FDVSIQGNVV LRDFNIMEEA EGAGKGIYKD FEASVDGSTL EIHLYWTGKG TNSIPKKGVY GPLISAIAVT NSDPNLGLSI
0601: GGIIGIVITS CMVLVLILVL LRMKGYLGGK DLEDRELREL GMQTGYFSLR QIKAATNNFD SASKIGEGGF GPVYKGVLSD GSVIAVKQLS SKSKQGNREF
0701: VNEIGLISAL QHPNLVKLYG CCVEGNQLLL IYEYLENNSL ARALFGSEEQ RLNLDWPTRK KICLGIARGL AYLHEESRLK IVHRDIKATN VLLDKYLNAK
0801: ISDFGLAKLD EDENTHISTR IAGTIGYMAP EYATRGYLTD KADVYSFGVV ALEIVSGKSN ANYRPKQESV YLLDWAYVLH EQGNLLELVD PSLGSNYSEE
0901: EVMGMLNLAL LCTNQSPTLR PSMSSVVSML DGKIAVQAPT IKHDSMNPDM RFKAFEKLSL DSQSLVSAFS VDSQVQGSIS VDGPWADSSI SLHSREETRG
1001: FPSSSRVLTG HQDLYNTHLD

Best Arabidopsis Sequence Match ( AT1G53440.1 )
(BLAST)

0001: MGFFFSTRKG LLLIIFICLD IFGSNAQLLP EDEVQTLRTI FRKLQNQTVN IERTSCLDRK WNFVAESTSK LPTSNITCDC TFNASSVCRV TNIQLRGFNL
0101: RGIIPPEFGN LTRLTEIDLV LNFLSGTIPT TLSQIPLEIL AVTGNRLSGP FPPQLGQITT LTDVIMESNL FTGQLPPNLG NLRSLKRLLI SSNNITGRIP
0201: ESLSNLKNLT NFRIDGNSLS GKIPDFIGNW TRLVRLDLQG TSMEGPIPAS ISNLKNLTEL RITDLRGPTS PFPDLQNMTN MERLVLRNCL IREPIPEYIG
0301: TSMTMLKLLD LSSNMLNGTI PDTFRSLNAF NFMYLNNNSL TGPVPQFILD SKQNIDLSYN NFTQPPTLSC NQLDVNLISS YPSVTNNSVQ WCLRKDLPCP
0401: GDAHHSSLFI NCGGNRLKVD KDEYADDLNK RGASTFSSVS ERWGYSSSGA WLGNDGATYL ATDTFNLINE STPEYYKTAR LASQSLKYYG LCMRRGSYKV
0501: QLYFAEIMFS NDQTYSSLGR RLFDIYVQGI LLERDFNIAQ RAGGVGKPFL RQVDEVQVNG STLEIHLKWT GKGTNVIPTR GVYGPLISAI TVTPNFKVDT
0601: GKPLSNGVVA GIVIAACVAF GLLVLVILRL TGYLGGKEVD ENEELRGLDL QTGSFTLKQI KRATNNFDPE NKIGEGGFGP VYKGVLADGM TIAVKQLSSK
0701: SKQGNREFVT EIGMISALQH PNLVKLYGCC IEGKELLLVY EYLENNSLAR ALFGTEKQRL HLDWSTRNKV CIGIAKGLAY LHEESRLKIV HRDIKATNVL
0801: LDLSLNAKIS DFGLAKLDEE ENTHISTRIA GTIGYMAPEY AMRGYLTDKA DVYSFGVVCL EIVSGKSNTN YRPKEEFIYL LDWAYVLQEQ GSLLELVDPD
0901: LGTSFSKKEA MRMLNIALLC TNPSPTLRPP MSSVVSMLQG KIKVQPPLVK READPSGSAA MRFKALEHLS QDSESQVSTY TRNKEHKSSS SMDGPWVDSS
1001: FSDPSKDVSL LQQEEGNSSS SSRRLLDDLT DVEIE

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Source:UniProtKB/Swiss-Prot;Acc:C0LGG9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.