Factsheet for VIT_00s0125g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0092g00710.t01	Wine grape	plasma membrane	90.7	90.43
VIT_00s0125g00210.t01	Wine grape	cytosol	47.7	79.9
VIT_10s0092g00470.t01	Wine grape	cytosol	68.3	68.85
VIT_00s0125g00140.t01	Wine grape	cytosol	46.5	66.71
VIT_10s0092g00590.t01	Wine grape	plasma membrane	67.6	64.5
VIT_12s0055g00580.t01	Wine grape	plasma membrane	59.2	57.42
VIT_19s0014g00530.t01	Wine grape	plasma membrane	21.4	43.41
VIT_19s0014g00750.t01	Wine grape	plasma membrane	20.5	43.07
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	20.2	42.89
VIT_19s0014g00790.t01	Wine grape	cytosol, nucleus, plasma membrane	37.0	42.05
VIT_19s0014g00470.t01	Wine grape	plasma membrane	41.3	41.01
VIT_10s0003g02000.t01	Wine grape	plasma membrane	29.5	40.75
VIT_19s0014g00520.t01	Wine grape	plasma membrane	41.1	40.65
VIT_19s0014g00500.t01	Wine grape	plasma membrane	41.2	40.23
VIT_12s0028g01350.t01	Wine grape	plasma membrane	40.4	39.96
VIT_10s0003g01920.t01	Wine grape	plasma membrane	37.8	39.87
VIT_19s0014g00680.t01	Wine grape	plasma membrane	40.7	39.86
VIT_10s0003g01940.t01	Wine grape	plasma membrane, plastid, vacuole	30.5	38.95
VIT_10s0003g01990.t01	Wine grape	plasma membrane	35.2	38.34
VIT_19s0014g00810.t01	Wine grape	plasma membrane, plastid	39.1	38.33
VIT_10s0003g01880.t01	Wine grape	cytosol	36.7	38.15
VIT_10s0003g01860.t01	Wine grape	plastid, vacuole	25.5	37.12
VIT_10s0003g01980.t01	Wine grape	cytosol	35.4	34.91
VIT_12s0055g00590.t01	Wine grape	plasma membrane	58.5	27.79
VIT_19s0014g00830.t01	Wine grape	plasma membrane	41.9	25.58
VIT_10s0003g01900.t01	Wine grape	plasma membrane	33.7	22.3

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100259764	wikigene:100259764	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20
Gene3D:3.80.10.10	ProteinID:CCB46493	ProteinID:CCB46493.1	UniProt:F6H2Q1	EMBL:FN595230	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100259764	wikigene:LOC100259764	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Malectin	PFAM:PF07714
PFAM:PF11721	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00021086EF	ArrayExpress:VIT_00s0125g00090
EnsemblPlantsGene:VIT_00s0125g00090	EnsemblPlants:VIT_00s0125g00090.t01	RefSeq:XP_002271607	RefSeq:XP_002271607.2	RefSeq:XP_002271607.3	SEG:seg

Description

No Description!

Coordinates

chrUn:+:1284866..1300947

Molecular Weight (calculated)

111374.0 Da

IEP (calculated)

6.379

GRAVY (calculated)

-0.135

Length

1000 amino acids

Sequence
(BLAST)

001: MNYRMKLCAF SFFLLLLFQK SPAQNATLDP SEVETLNFLF NKWNMTSTEF WNMSGDPCSG PPITPSQYDD IYYKQAIKCN CTFNDNTTCH ISHLKVLNLN
101: KTGSIPKELT ALTFLSDLRL DKNYFTGPLP SFIANLSRMQ FIDVGHNALS GTIPKELGNL KELLMLAIGS NNFSGTLPPE LGNLPKLELI FIDSSGVGGE
201: IPSTFVKLKN MREMFLSDTP LTGKIPDFIG NWTKLKRLRI QGNSFEGPIP STFSQLISME SLRISDLANV SSSLDFIKDM KNLTDLVLRN TLISGSIPSY
301: IEEYRSLETL DLSFNNITGR IPKALFNMNN LTALFLGNNS FYGPLPEEKS DKLQTIDLSY NEISGGFPTW IDPTLRLNLV ANNFVFDNTN KTIFEGLDCL
401: QRNFPCNTSR YTNVSIKCGG PEVIMPDGMV YEADNSISST ASTSFHESRS EKWAVSNVGL YVDKIANTTS QVNGTNTPEL FKTSRISPGS LRYYGLGLQN
501: GPYIVSLQFA EMLFKDPSTR TWESTGRRVF DIYIQGIRLE RDFDISKEAG GVQRAVVRKF HATVSKNYLE IHLLWAGKGT CCIPFEGYYG PSISALSVVS
601: ALERMPPPPS ETSNTGFIAG IAVVAGIVCF ILVCAVFYIQ RRGSNVNEEI ELLEIGPRPN TFSYAELRTA TGNFNPTNKL GEGGFGVVFK GTLLDGRAIA
701: VKDLMVASQQ GKSQFIAEIA TISAVQHRNL VKLHGFCIKE NKRLLVYEYL ENKSLDHALF GKIDLHLDWP TRYNICLGTA RGLAYLHEES RPRIVHRDVK
801: ASNILLDAEL CPKISDFGLA KLYDDKKTHI STRVAGTIGY LAPEYAMRGH LTEKADVFGF GVVALEILSG RPNTDNSLDA KKMYLLEWAW TLHENNQSMD
901: LVDPTLTEFD ENEVNRVMRV ALLCTQGSPM LRPTMSRVVA MLVGDVEVSA VTSKPSYLTD WHYNDITNSF LSENTQTSTA STSMTDQVPS PVLHIEPILR

Best Arabidopsis Sequence Match ( AT1G56120.2 )
(BLAST)

0001: MLRLRRSLFL LLTVWFLCCS GLVHVMVRAQ NRTRPTTHPD DARALNSIFA AWKIRAPREW NISGELCSGV AIDASVLDSN HAYNPLIKCD CSFQNSTICR
0101: INNIKVYAID VVGPIPPELW TLTYLTNLNL GQNYLTGSLS PAIGNLTRMQ WMTFGINALS GPIPKEIGLL TDLRLLGISS NNFSGSLPAE IGSCTKLQQM
0201: YIDSSGLSGG IPLSFANFVE LEVAWIMDVE LTGRIPDFIG FWTKLTTLRI LGTGLSGPIP SSFSNLIALT ELRLGDISNG SSSLDFIKDM KSLSVLVLRN
0301: NNLTGTIPST IGGYTSLQQV DLSFNKLHGP IPASLFNLSR LTHLFLGNNT LNGSLPTLKG QSLSNLDVSY NDLSGSLPSW VSLPDLKLNL VANNFTLEGL
0401: DNRVLSGLHC LQKNFPCNRG EGIYYNFSIN CGGPEIRSVS GALFEKEDAD LGPASFVVSA AKRWAASSVG NFAGSSNNIY IATSLAQFIN TMDSELFQSA
0501: RLSASSLRYY GLGLENGGYT VTLQFAEVQI EGSNSWKGIG RRRFNIYVQG RLVEKDFDIR RTAGGSSVRA VQREYKTNVS ENHLEVHLFW AGKGTCCIPI
0601: QGAYGPLIAA VSATPDFTPT VANRPPSKGK SRTGTIVGVI VGVGLLSIFA GVVILVIRKR RKPYTDDEEI LSMDVKPYTF TYSELKNATQ DFDLSNKLGE
0701: GGFGAVYKGN LNDGREVAVK QLSIGSRQGK GQFVAEIIAI SSVLHRNLVK LYGCCFEGDH RLLVYEYLPN GSLDQALFGD KSLHLDWSTR YEICLGVARG
0801: LVYLHEEASV RIIHRDVKAS NILLDSELVP KVSDFGLAKL YDDKKTHIST RVAGTIGYLA PEYAMRGHLT EKTDVYAFGV VALELVSGRK NSDENLEEGK
0901: KYLLEWAWNL HEKNRDVELI DDELSEYNME EVKRMIGIAL LCTQSSYALR PPMSRVVAML SGDAEVNDAT SKPGYLTDCT FDDTTSSSFS NFQTKDTSFS
1001: TSFIAPGPEM PLRDGESKPM VGFKIKEGR

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I3K0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.