Factsheet for VIT_19s0014g00790.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0014g00750.t01	Wine grape	plasma membrane	50.0	92.44
VIT_19s0014g00810.t01	Wine grape	plasma membrane, plastid	90.45	78.04
PGSC0003DMT400034331	Potato	plasma membrane	41.48	75.26
PGSC0003DMT400039817	Potato	plastid	50.34	70.65
PGSC0003DMT400035698	Potato	cytosol, endoplasmic reticulum, plasma membrane	37.73	68.31
VIT_19s0014g00680.t01	Wine grape	plasma membrane	75.91	65.43
PGSC0003DMT400073675	Potato	plasma membrane	63.52	60.5
KRH26159	Soybean	plasma membrane	66.93	58.26
KRH55049	Soybean	endoplasmic reticulum	66.82	58.1
Solyc12g014350.1.1	Tomato	endoplasmic reticulum, extracellular	66.59	57.56
KRH27378	Soybean	plasma membrane	65.45	57.2
KRH21908	Soybean	plasma membrane	66.48	57.18
KRH27392	Soybean	plasma membrane	65.34	57.16
VIT_19s0014g00530.t01	Wine grape	plasma membrane	30.91	55.17
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	29.09	54.35
AT1G53430.1	Thale cress	plasma membrane	62.73	53.18
Bra038124.1-P	Field mustard	plasma membrane	61.48	53.09
GSMUA_Achr6P25940_001	Banana	plasma membrane	58.41	52.66
AT1G53440.1	Thale cress	plasma membrane	61.82	52.56
CDY25853	Canola	plasma membrane	61.48	51.82
CDY60204	Canola	plasma membrane	61.36	51.72
VIT_10s0003g02000.t01	Wine grape	plasma membrane	41.82	50.83
VIT_12s0028g01350.t01	Wine grape	plasma membrane	56.59	49.26
GSMUA_Achr1P04980_001	Banana	plasma membrane	55.8	48.81
VIT_19s0014g00470.t01	Wine grape	plasma membrane	55.11	48.16
VIT_19s0014g00520.t01	Wine grape	plasma membrane	55.23	48.07
VIT_19s0014g00500.t01	Wine grape	plasma membrane	55.57	47.75
VIT_00s0125g00210.t01	Wine grape	cytosol	31.82	46.9
VIT_10s0003g01860.t01	Wine grape	plastid, vacuole	36.25	46.43
VIT_10s0003g01990.t01	Wine grape	plasma membrane	47.73	45.75
VIT_10s0003g01940.t01	Wine grape	plasma membrane, plastid, vacuole	40.68	45.72
Zm00001d016242_P002	Maize	plasma membrane	45.0	45.0
VIT_10s0003g01920.t01	Wine grape	plasma membrane	47.73	44.3
KXG29872	Sorghum	plasma membrane	51.7	44.17
VIT_10s0003g01880.t01	Wine grape	cytosol	47.61	43.56
VIT_10s0003g01980.t01	Wine grape	cytosol	45.8	39.74
VIT_00s0125g00140.t01	Wine grape	cytosol	31.36	39.6
VIT_10s0092g00470.t01	Wine grape	cytosol	44.09	39.11
VIT_12s0055g00580.t01	Wine grape	plasma membrane	44.66	38.12
VIT_19s0014g00830.t01	Wine grape	plasma membrane	70.68	37.97
VIT_10s0092g00710.t01	Wine grape	plasma membrane	42.27	37.09
VIT_00s0125g00090.t01	Wine grape	plasma membrane	42.05	37.0
VIT_10s0092g00590.t01	Wine grape	plasma membrane	43.3	36.35
Os02t0232500-01	Rice	extracellular, plasma membrane	29.43	36.02
VIT_10s0003g01900.t01	Wine grape	plasma membrane	45.45	26.47
VIT_12s0055g00590.t01	Wine grape	plasma membrane	44.66	18.67

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ProteinID:CCB46215
ProteinID:CCB46215.1	UniProt:F6H1V1	EMBL:FN595229	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Malectin	PFAM:PF00560	PFAM:PF07714	PFAM:PF11721	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF101	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002108CBB	ArrayExpress:VIT_19s0014g00790	EnsemblPlantsGene:VIT_19s0014g00790
EnsemblPlants:VIT_19s0014g00790.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr19:+:793823..800636

Molecular Weight (calculated)

97458.9 Da

IEP (calculated)

6.470

GRAVY (calculated)

-0.221

Length

880 amino acids

Sequence
(BLAST)

001: MLGQLKGLDL DGTLPDEFGN LSYLQELDLS RNYINGSIPT SLGRLSLTIL ALVGNRISGS IPEVISNIST LEELVLEANQ LGEHLPPSLG KLSHLRRLRI
101: DGNNLSGKIP DWIGNWTKLE KLYLQGTSMD GPIPSIISQL KNLTELLISD LSGPITSFPN LKDMNKLKTL VMRNCSITGE IPEDIGNIES LKLLDLSFNR
201: LSGTIPKSFK QEKKVKTKLD FMFLTNNSLT GEVPSWIRSD TENKMTPWCL QKDLPCSRKA KYYSLYINCG GEETTFKGKT YEKDNNVEGA SQFFTDSLDK
301: WAYSSTGVFI GNRHGSHLAK NESALNSKDA EIYQTARLAP ISLKYYGLCL QKGNYKVRLY FAEIMFFTNQ TFGSPGKRLF DVSIQGNVVL KDFNIMEEAK
401: GAGKGIYKDF DASVDGSTLE IHLYWTGKGT NSIPDEGVYG PLISAIAVTP KFNPNPGLSV GGIIGIVIPS CVVLILILVL LRMKGYLGGK DLEDRELREL
501: GMQTGYFSLR QIKAATNNFD SANKIGEGGF GPVYKGVLSD GSVSAVKQLS SKSKQGNREF VNEIGMISAL QHPNLVKLYG CCIEGNQLLL IYEYLENNSL
601: ARALFGSDEQ RLNLDWPTRK KICLGIARGL AYLHEESRLK IVHRDIKATN VLLDKNLNAK ISDFGLAKLD EDENTHISTR IAGTIGYMAP EYATRGYLTD
701: KADVYSFGIV ALEIVSGKSN TNYRPKEEFV YLLDWAYVLH EQGNLLELVD PSLGSNYSEE EVMRMLNLAL LCTNQSPTLR PPMSSVVSML DGKIAVQAPT
801: IKHDSMNPDM RFKAFEKLSL DSQSHVSAFS VDSQVQGSIS LDGPWIDSSI SLHSREETRD FSSSSKLLTG HQDLYSIHLD

Best Arabidopsis Sequence Match ( AT1G53440.1 )
(BLAST)

0001: MGFFFSTRKG LLLIIFICLD IFGSNAQLLP EDEVQTLRTI FRKLQNQTVN IERTSCLDRK WNFVAESTSK LPTSNITCDC TFNASSVCRV TNIQLRGFNL
0101: RGIIPPEFGN LTRLTEIDLV LNFLSGTIPT TLSQIPLEIL AVTGNRLSGP FPPQLGQITT LTDVIMESNL FTGQLPPNLG NLRSLKRLLI SSNNITGRIP
0201: ESLSNLKNLT NFRIDGNSLS GKIPDFIGNW TRLVRLDLQG TSMEGPIPAS ISNLKNLTEL RITDLRGPTS PFPDLQNMTN MERLVLRNCL IREPIPEYIG
0301: TSMTMLKLLD LSSNMLNGTI PDTFRSLNAF NFMYLNNNSL TGPVPQFILD SKQNIDLSYN NFTQPPTLSC NQLDVNLISS YPSVTNNSVQ WCLRKDLPCP
0401: GDAHHSSLFI NCGGNRLKVD KDEYADDLNK RGASTFSSVS ERWGYSSSGA WLGNDGATYL ATDTFNLINE STPEYYKTAR LASQSLKYYG LCMRRGSYKV
0501: QLYFAEIMFS NDQTYSSLGR RLFDIYVQGI LLERDFNIAQ RAGGVGKPFL RQVDEVQVNG STLEIHLKWT GKGTNVIPTR GVYGPLISAI TVTPNFKVDT
0601: GKPLSNGVVA GIVIAACVAF GLLVLVILRL TGYLGGKEVD ENEELRGLDL QTGSFTLKQI KRATNNFDPE NKIGEGGFGP VYKGVLADGM TIAVKQLSSK
0701: SKQGNREFVT EIGMISALQH PNLVKLYGCC IEGKELLLVY EYLENNSLAR ALFGTEKQRL HLDWSTRNKV CIGIAKGLAY LHEESRLKIV HRDIKATNVL
0801: LDLSLNAKIS DFGLAKLDEE ENTHISTRIA GTIGYMAPEY AMRGYLTDKA DVYSFGVVCL EIVSGKSNTN YRPKEEFIYL LDWAYVLQEQ GSLLELVDPD
0901: LGTSFSKKEA MRMLNIALLC TNPSPTLRPP MSSVVSMLQG KIKVQPPLVK READPSGSAA MRFKALEHLS QDSESQVSTY TRNKEHKSSS SMDGPWVDSS
1001: FSDPSKDVSL LQQEEGNSSS SSRRLLDDLT DVEIE

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Source:UniProtKB/Swiss-Prot;Acc:C0LGG9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.