Factsheet for GSMUA_Achr1P04980_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 2
cytosol 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P25940_001	Banana	plasma membrane	62.52	64.45
PGSC0003DMT400035698	Potato	cytosol, endoplasmic reticulum, plasma membrane	28.73	59.47
PGSC0003DMT400034331	Potato	plasma membrane	27.53	57.11
PGSC0003DMT400039817	Potato	plastid	34.99	56.14
VIT_19s0014g00790.t01	Wine grape	cytosol, nucleus, plasma membrane	48.81	55.8
VIT_19s0014g00750.t01	Wine grape	plasma membrane	26.34	55.67
GSMUA_Achr4P15520_001	Banana	cytosol	30.72	55.48
KRH55049	Soybean	endoplasmic reticulum	54.87	54.55
KRH26159	Soybean	plasma membrane	54.67	54.4
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	31.51	54.1
PGSC0003DMT400073675	Potato	plasma membrane	49.2	53.57
KRH27392	Soybean	plasma membrane	53.48	53.48
VIT_19s0014g00680.t01	Wine grape	plasma membrane	54.27	53.48
KRH27378	Soybean	plasma membrane	53.08	53.03
KRH21908	Soybean	plasma membrane	53.48	52.59
Solyc12g014350.1.1	Tomato	endoplasmic reticulum, extracellular	52.68	52.06
VIT_19s0014g00810.t01	Wine grape	plasma membrane, plastid	51.29	50.59
AT1G53430.1	Thale cress	plasma membrane	51.89	50.29
AT1G53440.1	Thale cress	plasma membrane	51.29	49.86
CDY60204	Canola	plasma membrane	51.59	49.71
Bra038124.1-P	Field mustard	plasma membrane	50.0	49.36
CDY25853	Canola	plasma membrane	50.8	48.95
Zm00001d016242_P002	Maize	plasma membrane	42.74	48.86
KXG29872	Sorghum	plasma membrane	49.9	48.74
Os02t0232500-01	Rice	extracellular, plasma membrane	32.51	45.48
GSMUA_Achr7P16620_001	Banana	cytosol, plasma membrane, plastid	21.97	34.86
GSMUA_Achr2P17280_001	Banana	plasma membrane	21.67	34.82
VIT_19s0014g00830.t01	Wine grape	plasma membrane	55.77	34.25
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	17.89	33.77
GSMUA_Achr8P07040_001	Banana	plasma membrane	35.29	33.05
GSMUA_Achr2P17300_001	Banana	plasma membrane	21.67	31.64

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr1G04980_001	EnsemblPlants:GSMUA_Achr1P04980_001	EnsemblPlants:GSMUA_Achr1T04980_001	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0RX56
InterPro:Malectin	PFAM:PF07714	PFAM:PF11721	PFAM:PF13855	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF101	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002955864	:	:	:

Description

Probable LRR receptor-like serine/threonine-protein kinase At1g53430 [Source:GMGC_GENE;Acc:GSMUA_Achr1G04980_001]

Coordinates

chr1:+:4122182..4133228

Molecular Weight (calculated)

111515.0 Da

IEP (calculated)

6.356

GRAVY (calculated)

-0.156

Length

1006 amino acids

Sequence
(BLAST)

0001: MKLCDEPVNA LKVIASKLKK KWNISVDPCS GTEGWIEPSS FIYVVSNLTC TCSPTINVCH VTSIQLKGQN LTGVLPDEFA NLTSLQVLDL ARNYLNGSIP
0101: VAWASLPLTT LSLLGNRISG KIPDEIGNII TLEELTLDCN QLEGLIPASI GNLINLNYLR LSANNLNGEL PDSLGKLTNL KEFIIDGNPI SGKIPSFIGN
0201: WTKLQRLDMQ GTLMEGPFPP TISNLTSIQQ LRVSDLRGGL GTFPALQNMN KMERLVLRNL SISGELPDFI AEMPTIKTLD VSFNNLSGPI PSSYDILRRS
0301: INYMYLTSNM LNGTIPDWIL GSDKNLRDLS YNTFTGSPIP SNCHQGNLNL VSSYSSTHNN FILSCCSSFY RVNSCLRRNL PCSEKARNCN LFINCGGEKA
0401: FVDGNEFEAD INQLGPAQYA STEKWAYSST GDFVDNRDEK YIAKNASLLN MTNSELYKTA RLSPLSLKYY GLCLQEGNYT VKLHFAEIMF TDDQNYSSLG
0501: QRIFDVSIQG NKVLRDYNIA KEANGTGKEK IEVFSDTYVD ADGTLEIHFQ WAGKGTHSIP HRSVYGPLIS AISVTPSMSL DSFPLKNPDH NGNTAICVFI
0601: MKAFSFLCSC LRLCPLFSLH PVSYLKQPCL PLKYHGPMLT CGSDDASSKL RRLELVTGYF SYKQIKTATK NFDIANKIGE GGFGPVYKGV LPDGTLIAVK
0701: QLSSKSKQGN REFVNEIGMI SALQHPNLVK LYGCCIEGNQ LLLIYEYMEN NSLAHSLFGS EQNRPRLDWK TRCNICLGVA TGLAYLHEES RLKIVHRDIK
0801: ATNILLDKNF NAKISDFGLA KLDEEENTHI STRIAGTRGY MAPEYALRGY LTDKADVYSF GVVLLEIVSG ICNTNYWQKK DLMFLLDWAY VLQEQGNLLE
0901: LVDPVLGSEY SKEEALRILN LALACTNPSP TRRPMMSNVV SILDGRTAMD FPAVEQTASG SLDLRLRVPE NIPSNEQSSM EILMAEEISK EESSLRSSAT
1001: MPRVAT

Best Arabidopsis Sequence Match ( AT1G53430.1 )
(BLAST)

0001: MGFIFSTEKV VYVLLLIFVC LENFGSNAQL LPEDEVQTLR TIFRKLQNQT VNIERTSCSD QNWNFVVESA SNSPTSNITC DCTFNASSVC RVTNIQLKSF
0101: SLPGIFPPEF GNLTRLREID LSRNFLNGTI PTTLSQIPLE ILSVIGNRLS GPFPPQLGDI TTLTDVNLET NLFTGPLPRN LGNLRSLKEL LLSANNFTGQ
0201: IPESLSNLKN LTEFRIDGNS LSGKIPDFIG NWTLLERLDL QGTSMEGPIP PSISNLTNLT ELRITDLRGQ AAFSFPDLRN LMKMKRLVLR NCLIRGPIPE
0301: YIGSMSELKT LDLSSNMLTG VIPDTFRNLD AFNFMFLNNN SLTGPVPQFI INSKENLDLS DNNFTQPPTL SCNQLDVNLI SSYPSVTDNS VQWCLREGLP
0401: CPEDAKQSSL FINCGGSRLK IGKDTYTDDL NSRGQSTFSS VSERWGYSSS GVWLGKEDAG YLATDRFNLI NGSTPEYYKT ARLSPQSLKY YGLCLRRGSY
0501: KLQLHFAEIM FSNDQTFNSL GRRIFDIYVQ GNLLERDFNI AERAGGVGKP FIRQIDGVQV NGSTLEIHLQ WTGKGTNVIP TRGVYGPLIS AITITPNFKV
0601: DTGKPLSNGA VAGIVIAACA VFGLLVLVIL RLTGYLGGKE VDENEELRGL DLQTGSFTLK QIKRATNNFD PENKIGEGGF GPVYKGVLAD GMTIAVKQLS
0701: SKSKQGNREF VTEIGMISAL QHPNLVKLYG CCIEGKELLL VYEYLENNSL ARALFGTEKQ RLHLDWSTRN KICIGIAKGL AYLHEESRLK IVHRDIKATN
0801: VLLDLSLNAK ISDFGLAKLN DDENTHISTR IAGTIGYMAP EYAMRGYLTD KADVYSFGVV CLEIVSGKSN TNYRPKEEFV YLLDWAYVLQ EQGSLLELVD
0901: PDLGTSFSKK EAMRMLNIAL LCTNPSPTLR PPMSSVVSML EGKIKVQPPL VKREADPSGS AAMRFKALEL LSQDSESQVS TYARNREQDI SSSSMDGPWV
1001: DSSFSEPGKD VSLQQQEEGR SSSSSRKLLD DLTDVKIE

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g53430 [Source:UniProtKB/Swiss-Prot;Acc:C0LGG8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.