Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G53430.1 | Thale cress | plasma membrane | 88.31 | 88.05 |
| Bra038124.1-P | Field mustard | plasma membrane | 77.1 | 78.31 |
| CDY60204 | Canola | plasma membrane | 78.36 | 77.68 |
| CDY25853 | Canola | plasma membrane | 77.78 | 77.11 |
| PGSC0003DMT400034331 | Potato | plasma membrane | 32.37 | 69.07 |
| PGSC0003DMT400039817 | Potato | plastid | 41.26 | 68.1 |
| VIT_19s0014g00750.t01 | Wine grape | plasma membrane | 31.01 | 67.44 |
| PGSC0003DMT400035698 | Potato | cytosol, endoplasmic reticulum, plasma membrane | 30.92 | 65.84 |
| PGSC0003DMT400073675 | Potato | plasma membrane | 55.56 | 62.23 |
| VIT_19s0014g00790.t01 | Wine grape | cytosol, nucleus, plasma membrane | 52.56 | 61.82 |
| Solyc12g014350.1.1 | Tomato | endoplasmic reticulum, extracellular | 60.0 | 61.0 |
| VIT_19s0014g00680.t01 | Wine grape | plasma membrane | 59.81 | 60.63 |
| KRH26159 | Soybean | plasma membrane | 58.45 | 59.84 |
| KRH55049 | Soybean | endoplasmic reticulum | 58.36 | 59.68 |
| KRH21908 | Soybean | plasma membrane | 58.74 | 59.43 |
| KRH27378 | Soybean | plasma membrane | 57.0 | 58.59 |
| KRH27392 | Soybean | plasma membrane | 56.81 | 58.45 |
| VIT_19s0014g00810.t01 | Wine grape | plasma membrane, plastid | 56.52 | 57.35 |
| GSMUA_Achr6P25940_001 | Banana | plasma membrane | 52.75 | 55.94 |
| GSMUA_Achr1P04980_001 | Banana | plasma membrane | 49.86 | 51.29 |
| AT1G07650.2 | Thale cress | plasma membrane | 48.79 | 49.51 |
| KXG29872 | Sorghum | plasma membrane | 47.92 | 48.16 |
| AT3G14840.2 | Thale cress | plasma membrane | 47.34 | 48.04 |
| Zm00001d016242_P002 | Maize | plasma membrane | 40.0 | 47.05 |
| AT1G53420.1 | Thale cress | plasma membrane | 42.32 | 45.96 |
| AT1G29720.1 | Thale cress | plasma membrane | 42.9 | 43.57 |
| AT1G29730.2 | Thale cress | plasma membrane | 41.64 | 43.06 |
| AT1G29750.2 | Thale cress | plasma membrane | 42.13 | 42.7 |
| Os02t0232500-01 | Rice | extracellular, plasma membrane | 28.89 | 41.59 |
| AT1G29740.1 | Thale cress | plasma membrane | 41.64 | 39.98 |
| AT1G56140.1 | Thale cress | plasma membrane | 39.42 | 39.5 |
| VIT_19s0014g00830.t01 | Wine grape | plasma membrane | 62.32 | 39.38 |
| AT1G56130.2 | Thale cress | plasma membrane | 38.45 | 38.57 |
| AT1G56120.1 | Thale cress | cytosol | 37.78 | 37.34 |
| AT1G56145.2 | Thale cress | plasma membrane | 36.72 | 36.57 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.8.2 | Gene3D:2.60.120.430 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | EntrezGene:841779 |
| UniProt:A0A178WLP5 | ProteinID:AAF78445.1 | ProteinID:AEE32941.1 | ArrayExpress:AT1G53440 | EnsemblPlantsGene:AT1G53440 | RefSeq:AT1G53440 |
| TAIR:AT1G53440 | RefSeq:AT1G53440-TAIR-G | EnsemblPlants:AT1G53440.1 | TAIR:AT1G53440.1 | Unigene:At.66887 | UniProt:C0LGG9 |
| ncoils:Coil | EMBL:FJ708658 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_dom_sf | InterPro:Malectin | RefSeq:NP_175749.1 | ProteinID:OAP18403.1 |
| PFAM:PF07714 | PFAM:PF11721 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27006 | PANTHER:PTHR27006:SF93 |
| InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF52058 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000048393 | SEG:seg | : | : |
Description
Probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Source:UniProtKB/Swiss-Prot;Acc:C0LGG9]
Coordinates
chr1:+:19945869..19951562
Molecular Weight (calculated)
114858.0 Da
IEP (calculated)
6.989
GRAVY (calculated)
-0.189
Length
1035 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGFFFSTRKG LLLIIFICLD IFGSNAQLLP EDEVQTLRTI FRKLQNQTVN IERTSCLDRK WNFVAESTSK LPTSNITCDC TFNASSVCRV TNIQLRGFNL
0101: RGIIPPEFGN LTRLTEIDLV LNFLSGTIPT TLSQIPLEIL AVTGNRLSGP FPPQLGQITT LTDVIMESNL FTGQLPPNLG NLRSLKRLLI SSNNITGRIP
0201: ESLSNLKNLT NFRIDGNSLS GKIPDFIGNW TRLVRLDLQG TSMEGPIPAS ISNLKNLTEL RITDLRGPTS PFPDLQNMTN MERLVLRNCL IREPIPEYIG
0301: TSMTMLKLLD LSSNMLNGTI PDTFRSLNAF NFMYLNNNSL TGPVPQFILD SKQNIDLSYN NFTQPPTLSC NQLDVNLISS YPSVTNNSVQ WCLRKDLPCP
0401: GDAHHSSLFI NCGGNRLKVD KDEYADDLNK RGASTFSSVS ERWGYSSSGA WLGNDGATYL ATDTFNLINE STPEYYKTAR LASQSLKYYG LCMRRGSYKV
0501: QLYFAEIMFS NDQTYSSLGR RLFDIYVQGI LLERDFNIAQ RAGGVGKPFL RQVDEVQVNG STLEIHLKWT GKGTNVIPTR GVYGPLISAI TVTPNFKVDT
0601: GKPLSNGVVA GIVIAACVAF GLLVLVILRL TGYLGGKEVD ENEELRGLDL QTGSFTLKQI KRATNNFDPE NKIGEGGFGP VYKGVLADGM TIAVKQLSSK
0701: SKQGNREFVT EIGMISALQH PNLVKLYGCC IEGKELLLVY EYLENNSLAR ALFGTEKQRL HLDWSTRNKV CIGIAKGLAY LHEESRLKIV HRDIKATNVL
0801: LDLSLNAKIS DFGLAKLDEE ENTHISTRIA GTIGYMAPEY AMRGYLTDKA DVYSFGVVCL EIVSGKSNTN YRPKEEFIYL LDWAYVLQEQ GSLLELVDPD
0901: LGTSFSKKEA MRMLNIALLC TNPSPTLRPP MSSVVSMLQG KIKVQPPLVK READPSGSAA MRFKALEHLS QDSESQVSTY TRNKEHKSSS SMDGPWVDSS
1001: FSDPSKDVSL LQQEEGNSSS SSRRLLDDLT DVEIE
0101: RGIIPPEFGN LTRLTEIDLV LNFLSGTIPT TLSQIPLEIL AVTGNRLSGP FPPQLGQITT LTDVIMESNL FTGQLPPNLG NLRSLKRLLI SSNNITGRIP
0201: ESLSNLKNLT NFRIDGNSLS GKIPDFIGNW TRLVRLDLQG TSMEGPIPAS ISNLKNLTEL RITDLRGPTS PFPDLQNMTN MERLVLRNCL IREPIPEYIG
0301: TSMTMLKLLD LSSNMLNGTI PDTFRSLNAF NFMYLNNNSL TGPVPQFILD SKQNIDLSYN NFTQPPTLSC NQLDVNLISS YPSVTNNSVQ WCLRKDLPCP
0401: GDAHHSSLFI NCGGNRLKVD KDEYADDLNK RGASTFSSVS ERWGYSSSGA WLGNDGATYL ATDTFNLINE STPEYYKTAR LASQSLKYYG LCMRRGSYKV
0501: QLYFAEIMFS NDQTYSSLGR RLFDIYVQGI LLERDFNIAQ RAGGVGKPFL RQVDEVQVNG STLEIHLKWT GKGTNVIPTR GVYGPLISAI TVTPNFKVDT
0601: GKPLSNGVVA GIVIAACVAF GLLVLVILRL TGYLGGKEVD ENEELRGLDL QTGSFTLKQI KRATNNFDPE NKIGEGGFGP VYKGVLADGM TIAVKQLSSK
0701: SKQGNREFVT EIGMISALQH PNLVKLYGCC IEGKELLLVY EYLENNSLAR ALFGTEKQRL HLDWSTRNKV CIGIAKGLAY LHEESRLKIV HRDIKATNVL
0801: LDLSLNAKIS DFGLAKLDEE ENTHISTRIA GTIGYMAPEY AMRGYLTDKA DVYSFGVVCL EIVSGKSNTN YRPKEEFIYL LDWAYVLQEQ GSLLELVDPD
0901: LGTSFSKKEA MRMLNIALLC TNPSPTLRPP MSSVVSMLQG KIKVQPPLVK READPSGSAA MRFKALEHLS QDSESQVSTY TRNKEHKSSS SMDGPWVDSS
1001: FSDPSKDVSL LQQEEGNSSS SSRRLLDDLT DVEIE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.