Factsheet for AT1G29720.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 5
vacuole 4
plasma membrane 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94698	Canola	plasma membrane	31.31	80.96
Bra034418.1-P	Field mustard	cytosol, plasma membrane, plastid	39.84	80.4
CDY35283	Canola	cytosol, plasma membrane, plastid	49.36	78.72
Bra028415.1-P	Field mustard	cytosol, plasma membrane, plastid	37.59	77.69
CDY35293	Canola	cytosol	60.55	76.46
CDY43183	Canola	mitochondrion, plasma membrane	65.65	76.02
CDX94703	Canola	plasma membrane	64.38	75.75
Bra032331.1-P	Field mustard	cytosol	52.4	75.42
Bra030168.1-P	Field mustard	mitochondrion, plasma membrane	62.22	75.39
CDY49080	Canola	cytosol	36.02	75.36
CDY35284	Canola	plasma membrane	75.07	75.15
Bra010817.1-P	Field mustard	plasma membrane	55.84	75.07
Bra030166.1-P	Field mustard	plasma membrane	52.99	74.48
CDY43181	Canola	cytosol	46.12	74.37
CDX99848	Canola	plasma membrane	73.99	73.99
CDX94701	Canola	cytosol	51.52	73.53
CDX67411	Canola	plasma membrane	51.13	73.38
CDY44292	Canola	plasma membrane	71.05	73.28
CDY28419	Canola	mitochondrion, plasma membrane	59.96	72.91
CDY13695	Canola	plasma membrane	73.11	72.9
Bra010816.1-P	Field mustard	plasma membrane	55.15	72.7
CDY26317	Canola	plasma membrane	72.13	72.56
CDX99849	Canola	plasma membrane	71.74	72.45
CDY26319	Canola	plasma membrane	72.13	72.34
Bra032332.1-P	Field mustard	plasma membrane	67.62	72.22
CDX94692	Canola	plasma membrane	69.38	71.13
Bra030161.1-P	Field mustard	plasma membrane	49.56	70.73
Bra030167.1-P	Field mustard	plasma membrane	64.57	67.56
CDY67675	Canola	cytosol	8.34	65.89
CDY35292	Canola	plasma membrane	71.84	65.3
CDY67674	Canola	cytosol	41.61	57.53
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	26.01	56.26
AT1G29730.2	Thale cress	plasma membrane	55.15	56.14
AT1G29740.1	Thale cress	plasma membrane	56.82	53.71
VIT_10s0003g01990.t01	Wine grape	plasma membrane	46.61	51.74
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	28.16	48.98
AT1G53420.1	Thale cress	plasma membrane	42.49	45.44
AT1G07650.2	Thale cress	plasma membrane	45.44	45.39
AT3G14840.2	Thale cress	plasma membrane	44.46	44.41
AT1G29750.2	Thale cress	plasma membrane	43.87	43.78
CDX90205	Canola	plasma membrane	75.27	43.7
AT1G53440.1	Thale cress	plasma membrane	43.57	42.9
AT1G53430.1	Thale cress	plasma membrane	43.57	42.77
AT1G56140.1	Thale cress	plasma membrane	37.19	36.69
AT1G56130.2	Thale cress	plasma membrane	37.0	36.53
AT1G56145.2	Thale cress	plasma membrane	36.6	35.9
AT1G56120.1	Thale cress	cytosol	36.21	35.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:839850
ProteinID:AAG10622.1	ProteinID:AAG50772.1	ProteinID:AEE31121.1	EMBL:AF367338	ArrayExpress:AT1G29720	EnsemblPlantsGene:AT1G29720
RefSeq:AT1G29720	TAIR:AT1G29720	RefSeq:AT1G29720-TAIR-G	EnsemblPlants:AT1G29720.1	TAIR:AT1G29720.1	EMBL:AY113170
Unigene:At.28730	EMBL:FJ708640	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Malectin	RefSeq:NP_564335.3	PFAM:PF07714
PFAM:PF11721	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009006	PO:PO:0009025	PO:PO:0009029
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0020030	PO:PO:0020038
PO:PO:0020137	PO:PO:0025022	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF55	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q9ASQ6	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0001E92AD8	SEG:seg

Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]

Coordinates

chr1:-:10393659..10399873

Molecular Weight (calculated)

112769.0 Da

IEP (calculated)

7.309

GRAVY (calculated)

-0.161

Length

1019 amino acids

Sequence
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.